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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-r.7   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.9   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-e.2   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.4.bio   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.4.hor   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.4.lig   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.4.str   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.4.tis   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 gma-u.5   100819845   probable lysine-specific demethylase ELF6 
 gma-u.5   100799861   probable lysine-specific demethylase ELF6 
 vvi-u.5   100256547   lysine-specific demethylase ELF6 
 ppo-u.5   7479874   lysine-specific demethylase ELF6 
 ppo-u.5   18102757   lysine-specific demethylase ELF6 
 mtr-u.5   11420302   probable lysine-specific demethylase ELF6 
 sly-u.5   101266411   lysine-specific demethylase ELF6 
 osa-u.5   9268736   probable lysine-specific demethylase SE14 
 zma-u.5   100381553   uncharacterized LOC100381553 

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Top 50 coexpressed genes to ELF6 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ELF6 (ath-u.5 coexpression data)

CoexMap"830303"


athELF6 | Entrez gene ID : 830303      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010219 [list] [network] regulation of vernalization response  (6 genes)  IMP  
GO:0048577 [list] [network] negative regulation of short-day photoperiodism, flowering  (7 genes)  IMP  
GO:0048579 [list] [network] negative regulation of long-day photoperiodism, flowering  (14 genes)  IMP  
GO:0010628 [list] [network] positive regulation of gene expression  (71 genes)  IMP  
GO:0009741 [list] [network] response to brassinosteroid  (101 genes)  IMP  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (174 genes)  IMP  
GO:0009826 [list] [network] unidimensional cell growth  (310 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0071558 [list] [network] histone H3K27me2/H3K27me3 demethylase activity  (5 genes)  IDA IMP  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_196044.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  chlo_mito 2,  cysk_nucl 1  (predict for NP_196044.2)
Subcellular
localization
TargetP
other 7  (predict for NP_196044.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ELF6

.
ath-r.7
for
ELF6

.
ath-m.9
for
ELF6

.
ath-e.2
for
ELF6

.
ath-m.4.bio
for
ELF6

.
ath-m.4.hor
for
ELF6

.
ath-m.4.lig
for
ELF6

.
ath-m.4.str
for
ELF6

.
ath-m.4.tis
for
ELF6

.
gma-u.5
for
100819845

.
gma-u.5
for
100799861

.
vvi-u.5
for
100256547

.
ppo-u.5
for
7479874

.
ppo-u.5
for
18102757

.
mtr-u.5
for
11420302

.
sly-u.5
for
101266411

.
osa-u.5
for
9268736

.
zma-u.5
for
100381553

.


Ortholog ID: 10273
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol ELF6 LOC100799861 LOC100819845 LOC101266411 LOC9268736 LOC100381553 LOC103847317 LOC100256547 LOC7479874 LOC18102757 LOC11420302 LOC123093530 LOC123088161 LOC123449830 LOC107904076 LOC107957377 LOC106372678 LOC125592306 LOC8085469 LOC102595804 LOC102606975 LOC100835298 LOC107775759 LOC107785352
Function* Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein probable lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 probable lysine-specific demethylase SE14 uncharacterized LOC100381553 probable lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 lysine-specific demethylase SE14 lysine-specific demethylase SE14 lysine-specific demethylase SE14 probable lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 lysine-specific demethylase SE14 probable lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 lysine-specific demethylase SE14 lysine-specific demethylase ELF6 lysine-specific demethylase ELF6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra00310 Lysine degradation 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 6
tae03013 Nucleocytoplasmic transport 3
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
ghi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
ghi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00910 Nitrogen metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830303 100799861 100819845 101266411 9268736 100381553 103847317 100256547 7479874 18102757 11420302 123093530 123088161 123449830 107904076 107957377 106372678 125592306 8085469 102595804 102606975 100835298 107775759 107785352
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