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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G06980   uncharacterized protein 
 ath-r.7   AT5G06980   uncharacterized protein 
 ath-m.9   AT5G06980   uncharacterized protein 
 ath-e.2   AT5G06980   uncharacterized protein 
 ath-m.4.bio   AT5G06980   uncharacterized protein 
 ath-m.4.hor   AT5G06980   uncharacterized protein 
 ath-m.4.lig   AT5G06980   uncharacterized protein 
 ath-m.4.str   AT5G06980   uncharacterized protein 
 ath-m.4.tis   AT5G06980   uncharacterized protein 
 ath-u.5   AT3G12320   uncharacterized protein 
 gma-u.5   100817056   protein LNK3 
 gma-u.5   100785636   protein LNK3 
 gma-u.5   100810608   protein LNK3 
 vvi-u.5   100264272   protein LNK3 
 ppo-u.5   7462803   protein LNK3 
 ppo-u.5   7455803   protein LNK3 
 mtr-u.5   11423831   protein LNK3 
 sly-u.5   ACI112   ACI112 protein 

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Top 50 coexpressed genes to AT5G06980 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G06980 (ath-u.5 coexpression data)

CoexMap"830589"


athAT5G06980 | Entrez gene ID : 830589      
Species ath gma vvi ppo mtr sly sot hvu tae cit sbi zma ghi cre bna nta bdi bra osa
Paralog 10 3 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007623 [list] [network] circadian rhythm  (124 genes)  IEA IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001190245.1 [sequence] [blastp]
NP_001190246.1 [sequence] [blastp]
NP_001330537.1 [sequence] [blastp]
NP_568176.1 [sequence] [blastp]
NP_850785.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001190245.1)
nucl 9  (predict for NP_001190246.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001330537.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_568176.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_850785.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001190245.1)
other 7,  mito 3  (predict for NP_001190246.1)
other 7,  mito 3  (predict for NP_001330537.1)
other 7,  mito 3  (predict for NP_568176.1)
other 7,  mito 3  (predict for NP_850785.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G06980

.
ath-r.7
for
AT5G06980

.
ath-m.9
for
AT5G06980

.
ath-e.2
for
AT5G06980

.
ath-m.4.bio
for
AT5G06980

.
ath-m.4.hor
for
AT5G06980

.
ath-m.4.lig
for
AT5G06980

.
ath-m.4.str
for
AT5G06980

.
ath-m.4.tis
for
AT5G06980

.
ath-u.5
for
AT3G12320

.
gma-u.5
for
100817056

.
gma-u.5
for
100785636

.
gma-u.5
for
100810608

.
vvi-u.5
for
100264272

.
ppo-u.5
for
7462803

.
ppo-u.5
for
7455803

.
mtr-u.5
for
11423831

.
sly-u.5
for
ACI112

.


Ortholog ID: 10075
Species ath ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta
Symbol AT5G06980 AT3G12320 LOC100810608 LOC100817056 ACI112 LOC103870257 LOC103847102 LOC100264272 LOC7455803 LOC7462803 LOC11423831 LOC107904791 LOC107904398 BNAA10G23470D BNAC03G37520D LOC102590196 LOC102613307 LOC107797680 LOC107810031
Function* uncharacterized protein uncharacterized protein protein LNK3 protein LNK3 ACI112 protein protein LNK3 protein LNK4 protein LNK3 protein LNK3 protein LNK3 protein LNK3 protein LNK3 protein LNK3 protein LNK4 protein LNK3 uncharacterized LOC102590196 protein LNK3 protein LNK4 protein LNK4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830589 820411 100810608 100817056 778220 103870257 103847102 100264272 7455803 7462803 11423831 107904791 107904398 106419501 106397486 102590196 102613307 107797680 107810031
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