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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CYS1   cystatin-1 
 ath-r.7   CYS1   cystatin-1 
 ath-m.9   CYS1   cystatin-1 
 ath-e.2   CYS1   cystatin-1 
 ath-m.4.bio   CYS1   cystatin-1 
 ath-m.4.hor   CYS1   cystatin-1 
 ath-m.4.lig   CYS1   cystatin-1 
 ath-m.4.str   CYS1   cystatin-1 
 ath-m.4.tis   CYS1   cystatin-1 
 ath-u.5   CYSA   cystatin A 
 bra-r.6   103846663   cysteine proteinase inhibitor 1 
 bra-r.6   CYS1-2   cysteine proteinase inhibitor 1 
 bra-r.6   103857959   cysteine proteinase inhibitor 3 
 bna-r.1   106391624   cysteine proteinase inhibitor 3 
 bna-r.1   106379229   cysteine proteinase inhibitor 1 
 bna-r.1   106443565   cysteine proteinase inhibitor 3 
 ghi-r.1   107891454   cysteine proteinase inhibitor 
 ghi-r.1   107889285   cysteine proteinase inhibitor 
 cit-r.1   102619852   cysteine proteinase inhibitor-like 
 gma-u.5   100797842   cysteine proteinase inhibitor 
 gma-u.5   L1   cysteine proteinase inhibitor 
 gma-u.5   R1   cysteine proteinase inhibitor 
 vvi-u.5   100258165   cysteine proteinase inhibitor A 
 ppo-u.5   7472991   cysteine proteinase inhibitor 
 ppo-u.5   7488170   cysteine proteinase inhibitor 
 mtr-u.5   11420916   cysteine proteinase inhibitor 
 mtr-u.5   11407914   cysteine proteinase inhibitor 
 sly-u.5   543632   cysteine proteinase inhibitor A 
 sot-r.1   102601109   cysteine proteinase inhibitor A-like 
 nta-r.1   107822566   cysteine proteinase inhibitor A 
 nta-r.1   107784088   cysteine proteinase inhibitor A 
 nta-r.1   107761445   cysteine proteinase inhibitor A 
 osa-u.5   4327535   cysteine proteinase inhibitor 1-like 
 osa-u.5   4339190   cysteine proteinase inhibitor 2-like 
 zma-u.5   542213   cystatin 1 
 zma-u.5   732752   cystatin 3 
 zma-u.5   100101525   cystatin 2 
 tae-r.2   123182455   cysteine proteinase inhibitor 
 tae-r.2   123079465   cysteine proteinase inhibitor 
 tae-r.2   123060800   cysteine proteinase inhibitor 
 hvu-r.1   123443999   cysteine proteinase inhibitor 
 hvu-r.1   123444630   cysteine proteinase inhibitor-like 
 sbi-r.1   8077044   cysteine proteinase inhibitor 
 sbi-r.1   110434198   cystatin-1-like 
 bdi-r.1   100834909   cysteine proteinase inhibitor 
 bdi-r.1   100841412   cysteine proteinase inhibitor 

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Top 50 coexpressed genes to CYS1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CYS1 (ath-u.5 coexpression data)

CoexMap"831087"


athCYS1 | Entrez gene ID : 831087      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 2 1 3 1 2 2 1 1 3 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070417 [list] [network] cellular response to cold  (38 genes)  IEP  
GO:0042631 [list] [network] cellular response to water deprivation  (41 genes)  IEP  
GO:0034605 [list] [network] cellular response to heat  (50 genes)  IEP  
GO:0009611 [list] [network] response to wounding  (271 genes)  IEP  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
Protein NP_196775.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  extr 1  (predict for NP_196775.1)
Subcellular
localization
TargetP
other 8  (predict for NP_196775.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CYS1
ath-r.7
for
CYS1
ath-m.9
for
CYS1
ath-e.2
for
CYS1
ath-m.4.bio
for
CYS1
ath-m.4.hor
for
CYS1
ath-m.4.lig
for
CYS1
ath-m.4.str
for
CYS1
ath-m.4.tis
for
CYS1
ath-u.5
for
CYSA
bra-r.6
for
103846663
bra-r.6
for
CYS1-2
bra-r.6
for
103857959
bna-r.1
for
106391624
bna-r.1
for
106379229
bna-r.1
for
106443565
ghi-r.1
for
107891454
ghi-r.1
for
107889285
cit-r.1
for
102619852
gma-u.5
for
100797842
gma-u.5
for
L1
gma-u.5
for
R1
vvi-u.5
for
100258165
ppo-u.5
for
7472991
ppo-u.5
for
7488170
mtr-u.5
for
11420916
mtr-u.5
for
11407914
sly-u.5
for
543632
sot-r.1
for
102601109
nta-r.1
for
107822566
nta-r.1
for
107784088
nta-r.1
for
107761445
osa-u.5
for
4327535
osa-u.5
for
4339190
zma-u.5
for
542213
zma-u.5
for
732752
zma-u.5
for
100101525
tae-r.2
for
123182455
tae-r.2
for
123079465
tae-r.2
for
123060800
hvu-r.1
for
123443999
hvu-r.1
for
123444630
sbi-r.1
for
8077044
sbi-r.1
for
110434198
bdi-r.1
for
100834909
bdi-r.1
for
100841412


Ortholog ID: 3670
Species ath ath bra bra bra bna bna bna ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol CYS1 CYSA LOC103846663 CYS1-2 LOC103857959 LOC106391624 LOC106443565 LOC106424586 LOC107891454 LOC107889285 LOC102619852 LOC100797842 L1 LOC100803955 LOC100258165 LOC7472991 LOC7488170 LOC11420916 LOC11407914 LOC543632 LOC102601109 LOC107784088 LOC107761445 LOC107809604 LOC4327535 LOC4339190 LOC542213 LOC732752 LOC100101525 LOC123079465 LOC123060800 LOC123137907 LOC123443999 LOC123444630 LOC8077044 LOC110434198 LOC100834909 LOC100841412
Function* cystatin-1 cystatin A cysteine proteinase inhibitor 1 cysteine proteinase inhibitor 1 cysteine proteinase inhibitor 3 cysteine proteinase inhibitor 3 cysteine proteinase inhibitor 3 cysteine proteinase inhibitor 1 cysteine proteinase inhibitor cysteine proteinase inhibitor cysteine proteinase inhibitor-like cysteine proteinase inhibitor cysteine proteinase inhibitor cysteine proteinase inhibitor cysteine proteinase inhibitor A cysteine proteinase inhibitor cysteine proteinase inhibitor cysteine proteinase inhibitor cysteine proteinase inhibitor cysteine proteinase inhibitor A cysteine proteinase inhibitor A-like cysteine proteinase inhibitor A cysteine proteinase inhibitor A cysteine proteinase inhibitor A-like cysteine proteinase inhibitor 1-like cysteine proteinase inhibitor 2-like cystatin 1 cystatin 3 cystatin 2 cysteine proteinase inhibitor cysteine proteinase inhibitor cysteine proteinase inhibitor cysteine proteinase inhibitor cysteine proteinase inhibitor-like cysteine proteinase inhibitor cystatin-1-like cysteine proteinase inhibitor cysteine proteinase inhibitor
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 2
bna00350 Tyrosine metabolism 2
bna00360 Phenylalanine metabolism 2
bna00410 beta-Alanine metabolism 2
bna00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 2
bna00350 Tyrosine metabolism 2
bna00360 Phenylalanine metabolism 2
bna00410 beta-Alanine metabolism 2
bna00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 3
nta00350 Tyrosine metabolism 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 4
nta00480 Glutathione metabolism 3
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 3
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 5
zma00020 Citrate cycle (TCA cycle) 3
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00280 Valine, leucine and isoleucine degradation 2
zma00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 8
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
sbi01200 Carbon metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831087 818685 103846663 103850816 103857959 106391624 106443565 106424586 107891454 107889285 102619852 100797842 547875 100803955 100258165 7472991 7488170 11420916 11407914 543632 102601109 107784088 107761445 107809604 4327535 4339190 542213 732752 100101525 123079465 123060800 123137907 123443999 123444630 8077044 110434198 100834909 100841412
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