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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G19950   tudor domain protein (DUF1767) 
 ath-r.7   AT5G19950   tudor domain protein (DUF1767) 
 ath-m.9   AT5G19950   tudor domain protein (DUF1767) 
 ath-e.2   AT5G19950   tudor domain protein (DUF1767) 
 ath-m.4.bio   AT5G19950   tudor domain protein (DUF1767) 
 ath-m.4.hor   AT5G19950   tudor domain protein (DUF1767) 
 ath-m.4.lig   AT5G19950   tudor domain protein (DUF1767) 
 ath-m.4.str   AT5G19950   tudor domain protein (DUF1767) 
 ath-m.4.tis   AT5G19950   tudor domain protein (DUF1767) 
 gma-u.5   100782461   tudor domain-containing protein 3 
 vvi-u.5   100243995   uncharacterized LOC100243995 
 ppo-u.5   7476249   uncharacterized LOC7476249 
 mtr-u.5   25486726   tudor domain-containing protein 3 
 sly-u.5   101267092   uncharacterized LOC101267092 
 osa-u.5   4323867   uncharacterized LOC4323867 
 zma-u.5   100278570   putative DUF1767 domain containing protein 

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Top 50 coexpressed genes to AT5G19950 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G19950 (ath-u.5 coexpression data)

CoexMap"832117"


athAT5G19950 | Entrez gene ID : 832117      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_568387.1 [sequence] [blastp]
NP_850854.1 [sequence] [blastp]
NP_974813.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 5,  cyto 2  (predict for NP_568387.1)
nucl 6,  cyto_nucl 5,  cyto 2  (predict for NP_850854.1)
nucl 6,  cyto_nucl 5,  cyto 2  (predict for NP_974813.1)
Subcellular
localization
TargetP
other 8  (predict for NP_568387.1)
other 8  (predict for NP_850854.1)
other 8  (predict for NP_974813.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G19950

.
ath-r.7
for
AT5G19950

.
ath-m.9
for
AT5G19950

.
ath-e.2
for
AT5G19950

.
ath-m.4.bio
for
AT5G19950

.
ath-m.4.hor
for
AT5G19950

.
ath-m.4.lig
for
AT5G19950

.
ath-m.4.str
for
AT5G19950

.
ath-m.4.tis
for
AT5G19950

.
gma-u.5
for
100782461

.
vvi-u.5
for
100243995

.
ppo-u.5
for
7476249

.
mtr-u.5
for
25486726

.
sly-u.5
for
101267092

.
osa-u.5
for
4323867

.
zma-u.5
for
100278570

.


Ortholog ID: 10947
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G19950 LOC100782461 LOC101267092 LOC4323867 LOC100278570 LOC103845707 LOC100243995 LOC7476249 LOC25486726 LOC123069023 LOC123077547 LOC123442996 LOC107901205 LOC107962653 LOC106439475 LOC106371774 CHLRE_16g653000v5 LOC8056527 LOC102599792 LOC102630751 LOC100822625 LOC107825713 LOC107818336
Function* tudor domain protein (DUF1767) tudor domain-containing protein 3 uncharacterized LOC101267092 uncharacterized LOC4323867 putative DUF1767 domain containing protein tudor domain-containing protein 3 uncharacterized LOC100243995 uncharacterized LOC7476249 tudor domain-containing protein 3 tudor domain-containing protein 3 tudor domain-containing protein 3 tudor domain-containing protein 3 tudor domain-containing protein 3 tudor domain-containing protein 3 tudor domain-containing protein 3 tudor domain-containing protein 3 uncharacterized protein tudor domain-containing protein 3 tudor domain-containing protein 3 uncharacterized LOC102630751 tudor domain-containing protein 3 uncharacterized LOC107825713 uncharacterized LOC107818336
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr04120 Ubiquitin mediated proteolysis 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi00450 Selenocompound metabolism 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 9
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 2
cre00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 3
cit03040 Spliceosome 3
cit04142 Lysosome 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832117 100782461 101267092 4323867 100278570 103845707 100243995 7476249 25486726 123069023 123077547 123442996 107901205 107962653 106439475 106371774 66056516 8056527 102599792 102630751 100822625 107825713 107818336
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