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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G22040   ubiquitin carboxyl-terminal hydrolase 
 ath-r.7   AT5G22040   ubiquitin carboxyl-terminal hydrolase 
 ath-e.2   AT5G22040   ubiquitin carboxyl-terminal hydrolase 
 bna-r.1   106386959   uncharacterized LOC106386959 
 bna-r.1   106419566   uncharacterized LOC106419566 
 ghi-r.1   107906659   uncharacterized LOC107906659 
 ghi-r.1   107959235   uncharacterized LOC107959235 
 cit-r.1   102625293   uncharacterized LOC102625293 
 gma-u.5   100802231   uncharacterized LOC100802231 
 gma-u.5   100789541   uncharacterized LOC100789541 
 vvi-u.5   100261604   uncharacterized LOC100261604 
 ppo-u.5   7469511   uncharacterized LOC7469511 
 mtr-u.5   11445207   uncharacterized LOC11445207 
 mtr-u.5   11416262   uncharacterized LOC11416262 
 sly-u.5   101262688   uncharacterized LOC101262688 
 sot-r.1   102581583   probable serine/threonine-protein kinase DDB_G0280133 
 nta-r.1   107822099   uncharacterized LOC107822099 
 nta-r.1   107778476   uncharacterized LOC107778476 
 osa-u.5   4332404   uncharacterized LOC4332404 
 zma-u.5   100276087   uncharacterized LOC100276087 
 tae-r.2   123097908   uncharacterized LOC123097908 
 tae-r.2   123092602   uncharacterized LOC123092602 
 tae-r.2   123085445   uncharacterized LOC123085445 
 hvu-r.1   123449021   uncharacterized LOC123449021 
 sbi-r.1   8084938   uncharacterized LOC8084938 
 bdi-r.1   100831278   uncharacterized LOC100831278 

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Top 50 coexpressed genes to AT5G22040 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G22040 (ath-u.5 coexpression data)

CoexMap"832265"


athAT5G22040 | Entrez gene ID : 832265      
Species ath bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bra
Paralog 3 2 2 1 2 1 1 2 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001119259.1 [sequence] [blastp]
NP_001190358.1 [sequence] [blastp]
NP_680191.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001119259.1)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001190358.1)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_680191.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001119259.1)
other 6,  mito 3  (predict for NP_001190358.1)
other 6,  mito 3  (predict for NP_680191.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G22040
ath-r.7
for
AT5G22040
ath-e.2
for
AT5G22040
bna-r.1
for
106386959
bna-r.1
for
106419566
ghi-r.1
for
107906659
ghi-r.1
for
107959235
cit-r.1
for
102625293
gma-u.5
for
100802231
gma-u.5
for
100789541
vvi-u.5
for
100261604
ppo-u.5
for
7469511
mtr-u.5
for
11445207
mtr-u.5
for
11416262
sly-u.5
for
101262688
sot-r.1
for
102581583
nta-r.1
for
107822099
nta-r.1
for
107778476
osa-u.5
for
4332404
zma-u.5
for
100276087
tae-r.2
for
123097908
tae-r.2
for
123092602
tae-r.2
for
123085445
hvu-r.1
for
123449021
sbi-r.1
for
8084938
bdi-r.1
for
100831278


Ortholog ID: 9684
Species ath bna bna ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G22040 LOC106386959 LOC106419566 LOC107906659 LOC107959235 LOC102625293 LOC100802231 LOC100789541 LOC100261604 LOC7469511 LOC11445207 LOC11416262 LOC101262688 LOC102581583 LOC107822099 LOC107778476 LOC4332404 LOC100276087 LOC123097908 LOC123092602 LOC123085445 LOC123449021 LOC8084938 LOC100831278
Function* ubiquitin carboxyl-terminal hydrolase uncharacterized LOC106386959 uncharacterized LOC106419566 uncharacterized LOC107906659 uncharacterized LOC107959235 uncharacterized LOC102625293 uncharacterized LOC100802231 uncharacterized LOC100789541 uncharacterized LOC100261604 uncharacterized LOC7469511 uncharacterized LOC11445207 uncharacterized LOC11416262 uncharacterized LOC101262688 probable serine/threonine-protein kinase DDB_G0280133 uncharacterized LOC107822099 uncharacterized LOC107778476 uncharacterized LOC4332404 uncharacterized LOC100276087 uncharacterized LOC123097908 uncharacterized LOC123092602 uncharacterized LOC123085445 uncharacterized LOC123449021 uncharacterized LOC8084938 uncharacterized LOC100831278
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03015 mRNA surveillance pathway 5
tae00310 Lysine degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03082 ATP-dependent chromatin remodeling 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 8
tae03040 Spliceosome 8
tae03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832265 106386959 106419566 107906659 107959235 102625293 100802231 100789541 100261604 7469511 11445207 11416262 101262688 102581583 107822099 107778476 4332404 100276087 123097908 123092602 123085445 123449021 8084938 100831278
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