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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G28300   Duplicated homeodomain-like superfamily protein 
 ath-r.7   AT5G28300   Duplicated homeodomain-like superfamily protein 
 ath-m.9   AT5G28300   Duplicated homeodomain-like superfamily protein 
 ath-e.2   AT5G28300   Duplicated homeodomain-like superfamily protein 
 ath-m.4.bio   AT5G28300   Duplicated homeodomain-like superfamily protein 
 ath-m.4.hor   AT5G28300   Duplicated homeodomain-like superfamily protein 
 ath-m.4.lig   AT5G28300   Duplicated homeodomain-like superfamily protein 
 ath-m.4.str   AT5G28300   Duplicated homeodomain-like superfamily protein 
 ath-m.4.tis   AT5G28300   Duplicated homeodomain-like superfamily protein 
 gma-u.5   100801868   trihelix transcription factor GTL2 
 gma-u.5   100804367   trihelix transcription factor GTL2-like 
 gma-u.5   GT-2B   trihelix transcription factor 
 vvi-u.5   100255432   trihelix transcription factor GTL2 
 ppo-u.5   7474599   trihelix transcription factor GTL2 
 ppo-u.5   18098953   trihelix transcription factor GTL2 
 mtr-u.5   11410023   trihelix transcription factor GTL2 

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Top 50 coexpressed genes to AT5G28300 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G28300 (ath-u.5 coexpression data)

CoexMap"832914"


athAT5G28300 | Entrez gene ID : 832914      
Species ath gma vvi ppo mtr sot hvu tae cit sbi sly zma ghi cre bna nta bdi bra osa
Paralog 9 3 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IDA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0000987 [list] [network] cis-regulatory region sequence-specific DNA binding  (55 genes)  IDA  
GO:0005516 [list] [network] calmodulin binding  (128 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_568506.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_568506.2)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for NP_568506.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G28300

.
ath-r.7
for
AT5G28300

.
ath-m.9
for
AT5G28300

.
ath-e.2
for
AT5G28300

.
ath-m.4.bio
for
AT5G28300

.
ath-m.4.hor
for
AT5G28300

.
ath-m.4.lig
for
AT5G28300

.
ath-m.4.str
for
AT5G28300

.
ath-m.4.tis
for
AT5G28300

.
gma-u.5
for
100801868

.
gma-u.5
for
100804367

.
gma-u.5
for
GT-2B

.
vvi-u.5
for
100255432

.
ppo-u.5
for
7474599

.
ppo-u.5
for
18098953

.
mtr-u.5
for
11410023

.


Ortholog ID: 12467
Species ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna cit
Symbol AT5G28300 LOC100804367 LOC100801868 LOC103874574 LOC103854639 LOC100255432 LOC18098953 LOC7474599 LOC11410023 LOC107926820 LOC107888971 LOC106367775 LOC106348639 LOC102612135
Function* Duplicated homeodomain-like superfamily protein trihelix transcription factor GTL2-like trihelix transcription factor GTL2 trihelix transcription factor GTL2 trihelix transcription factor GTL2 trihelix transcription factor GTL2 trihelix transcription factor GTL2 trihelix transcription factor GTL2 trihelix transcription factor GTL2 trihelix transcription factor GTL2 trihelix transcription factor GTL2 trihelix transcription factor GTL2 trihelix transcription factor GTL2 trihelix transcription factor GTL2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00942 Anthocyanin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00942 Anthocyanin biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832914 100804367 100801868 103874574 103854639 100255432 18098953 7474599 11410023 107926820 107888971 106367775 106348639 102612135
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