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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PLR1   NAD(P)-linked oxidoreductase superfamily protein 
 ath-r.7   PLR1   NAD(P)-linked oxidoreductase superfamily protein 
 ath-m.9   PLR1   NAD(P)-linked oxidoreductase superfamily protein 
 ath-e.2   PLR1   NAD(P)-linked oxidoreductase superfamily protein 
 ath-m.4.bio   PLR1   NAD(P)-linked oxidoreductase superfamily protein 
 ath-m.4.hor   PLR1   NAD(P)-linked oxidoreductase superfamily protein 
 ath-m.4.lig   PLR1   NAD(P)-linked oxidoreductase superfamily protein 
 ath-m.4.str   PLR1   NAD(P)-linked oxidoreductase superfamily protein 
 ath-m.4.tis   PLR1   NAD(P)-linked oxidoreductase superfamily protein 
 gma-u.5   100804159   pyridoxal reductase, chloroplastic 
 gma-u.5   100791681   pyridoxal reductase, chloroplastic 
 vvi-u.5   100258867   pyridoxal reductase, chloroplastic 
 ppo-u.5   7464517   pyridoxal reductase, chloroplastic 
 mtr-u.5   11444754   pyridoxal reductase, chloroplastic 
 sly-u.5   101244752   pyridoxal reductase, chloroplastic 
 osa-u.5   4349122   pyridoxal reductase, chloroplastic 
 zma-u.5   100193172   uncharacterized LOC100193172 

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Top 50 coexpressed genes to PLR1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PLR1 (ath-u.5 coexpression data)

CoexMap"835440"


athPLR1 | Entrez gene ID : 835440      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00750 [list] [network] Vitamin B6 metabolism (15 genes)
GO BP
GO:0042821 [list] [network] pyridoxal biosynthetic process  (1 genes)  IDA  
GO:0009443 [list] [network] pyridoxal 5'-phosphate salvage  (2 genes)  IDA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
GO:0050236 [list] [network] pyridoxine 4-dehydrogenase (NADP+) activity  (1 genes)  IDA  
GO:0070402 [list] [network] NADPH binding  (3 genes)  IDA  
Protein NP_200170.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 4,  cyto 4,  nucl_plas 2,  cyto_E.R. 2,  plas 1  (predict for NP_200170.2)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_200170.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PLR1

.
ath-r.7
for
PLR1

.
ath-m.9
for
PLR1

.
ath-e.2
for
PLR1

.
ath-m.4.bio
for
PLR1

.
ath-m.4.hor
for
PLR1

.
ath-m.4.lig
for
PLR1

.
ath-m.4.str
for
PLR1

.
ath-m.4.tis
for
PLR1

.
gma-u.5
for
100804159

.
gma-u.5
for
100791681

.
vvi-u.5
for
100258867

.
ppo-u.5
for
7464517

.
mtr-u.5
for
11444754

.
sly-u.5
for
101244752

.
osa-u.5
for
4349122

.
zma-u.5
for
100193172

.


Ortholog ID: 10392
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PLR1 LOC100804159 LOC100791681 LOC101244752 LOC4349122 LOC100193172 LOC103844833 LOC100258867 LOC7464517 LOC11444754 LOC123124501 LOC123181338 LOC123434655 LOC107911714 LOC107946237 LOC106418547 LOC106371282 CHLRE_04g216350v5 LOC8065692 LOC102586055 LOC102627243 LOC100831456 LOC107810859 LOC107768132
Function* NAD(P)-linked oxidoreductase superfamily protein pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic uncharacterized LOC100193172 pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic uncharacterized protein pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic pyridoxal reductase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 3
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00010 Glycolysis / Gluconeogenesis 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00750 Vitamin B6 metabolism 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00750 Vitamin B6 metabolism 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
ghi00750 Vitamin B6 metabolism 2
ghi03010 Ribosome 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
ghi03430 Mismatch repair 2
ghi00750 Vitamin B6 metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00350 Tyrosine metabolism 2
bna00360 Phenylalanine metabolism 2
bna00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00350 Tyrosine metabolism 2
bna00360 Phenylalanine metabolism 2
bna00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi00195 Photosynthesis 4
bdi00710 Carbon fixation by Calvin cycle 4
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00750 Vitamin B6 metabolism 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00750 Vitamin B6 metabolism 2
nta00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835440 100804159 100791681 101244752 4349122 100193172 103844833 100258867 7464517 11444754 123124501 123181338 123434655 107911714 107946237 106418547 106371282 5724242 8065692 102586055 102627243 100831456 107810859 107768132
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