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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G53940   Yippee family putative zinc-binding protein 
 ath-r.7   AT5G53940   Yippee family putative zinc-binding protein 
 ath-m.9   AT5G53940   Yippee family putative zinc-binding protein 
 ath-e.2   AT5G53940   Yippee family putative zinc-binding protein 
 ath-m.4.bio   AT5G53940   Yippee family putative zinc-binding protein 
 ath-m.4.hor   AT5G53940   Yippee family putative zinc-binding protein 
 ath-m.4.lig   AT5G53940   Yippee family putative zinc-binding protein 
 ath-m.4.str   AT5G53940   Yippee family putative zinc-binding protein 
 ath-m.4.tis   AT5G53940   Yippee family putative zinc-binding protein 
 ath-u.5   AT2G40110   Yippee family putative zinc-binding protein 
 ath-u.5   AT4G27745   Yippee family putative zinc-binding protein 
 ath-u.5   AT4G27740   Yippee family putative zinc-binding protein 
 bra-r.6   103870364   protein yippee-like At3g11230 
 bra-r.6   103867611   protein yippee-like At4g27745 
 bra-r.6   103867602   protein yippee-like At4g27740 
 bna-r.1   106452541   protein yippee-like At3g11230 
 bna-r.1   125579144   protein yippee-like At5g53940 
 ghi-r.1   107922732   protein yippee-like At4g27745 
 ghi-r.1   107920417   protein yippee-like 
 ghi-r.1   107918209   protein yippee-like At5g53940 
 cit-r.1   102609322   protein yippee-like 
 cit-r.1   102615140   protein yippee-like At4g27745 
 gma-u.5   100527552   uncharacterized LOC100527552 
 gma-u.5   100526937   uncharacterized LOC100526937 
 gma-u.5   100500458   yippee family putative zinc-binding protein 
 vvi-u.5   100267441   protein yippee-like At5g53940 
 vvi-u.5   100241103   protein yippee-like At4g27745 
 vvi-u.5   100246985   protein yippee-like At4g27745 
 ppo-u.5   18103372   protein yippee-like At5g53940 
 ppo-u.5   7494483   protein yippee-like 
 ppo-u.5   7475167   protein yippee-like At4g27745 
 mtr-u.5   25487301   protein yippee-like At5g53940 
 sly-u.5   101250064   protein yippee-like 
 sly-u.5   101259957   protein yippee-like At5g53940 
 sot-r.1   102595997   protein yippee-like At5g53940 
 nta-r.1   107808421   protein yippee-like 
 nta-r.1   107795136   protein yippee-like 
 nta-r.1   107784927   protein yippee-like At4g27740 
 osa-u.5   4350710   protein yippee-like At4g27745 
 osa-u.5   4343737   putative yippee-like protein Os10g0369500 
 osa-u.5   4352226   protein yippee-like At4g27745 
 zma-u.5   100285476   protein yippee-like 
 zma-u.5   100280486   uncharacterized LOC100280486 
 zma-u.5   100285471   uncharacterized LOC100285471 
 tae-r.2   123052272   putative yippee-like protein Os10g0369500 
 tae-r.2   123044415   putative yippee-like protein Os10g0369500 
 tae-r.2   123087184   protein yippee-like 
 hvu-r.1   123447292   protein yippee-like 
 hvu-r.1   123412778   protein yippee-like At4g27745 
 hvu-r.1   123448313   uncharacterized LOC123448313 
 sbi-r.1   8054122   protein yippee-like 
 sbi-r.1   8072884   protein yippee-like At3g55890 
 sbi-r.1   8054263   putative yippee-like protein Os10g0369500 
 bdi-r.1   100843222   protein yippee-like 
 bdi-r.1   100842583   protein yippee-like At4g27745 
 bdi-r.1   100841981   protein yippee-like At4g27745 
 cre-r.1   CHLRE_07g355500v5   uncharacterized protein 
 cre-r.1   CHLRE_08g377550v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G53940 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G53940 (ath-u.5 coexpression data)

CoexMap"835477"


athAT5G53940 | Entrez gene ID : 835477    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 2 3 2 3 3 3 1 2 1 3 3 3 3 3 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_200205.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  mito 1,  extr 1,  pero 1,  chlo_mito 1  (predict for NP_200205.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_200205.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G53940
ath-r.7
for
AT5G53940
ath-m.9
for
AT5G53940
ath-e.2
for
AT5G53940
ath-m.4.bio
for
AT5G53940
ath-m.4.hor
for
AT5G53940
ath-m.4.lig
for
AT5G53940
ath-m.4.str
for
AT5G53940
ath-m.4.tis
for
AT5G53940
ath-u.5
for
AT2G40110
ath-u.5
for
AT4G27745
ath-u.5
for
AT4G27740
bra-r.6
for
103870364
bra-r.6
for
103867611
bra-r.6
for
103867602
bna-r.1
for
106452541
bna-r.1
for
125579144
ghi-r.1
for
107922732
ghi-r.1
for
107920417
ghi-r.1
for
107918209
cit-r.1
for
102609322
cit-r.1
for
102615140
gma-u.5
for
100527552
gma-u.5
for
100526937
gma-u.5
for
100500458
vvi-u.5
for
100267441
vvi-u.5
for
100241103
vvi-u.5
for
100246985
ppo-u.5
for
18103372
ppo-u.5
for
7494483
ppo-u.5
for
7475167
mtr-u.5
for
25487301
sly-u.5
for
101250064
sly-u.5
for
101259957
sot-r.1
for
102595997
nta-r.1
for
107808421
nta-r.1
for
107795136
nta-r.1
for
107784927
osa-u.5
for
4350710
osa-u.5
for
4343737
osa-u.5
for
4352226
zma-u.5
for
100285476
zma-u.5
for
100280486
zma-u.5
for
100285471
tae-r.2
for
123052272
tae-r.2
for
123044415
tae-r.2
for
123087184
hvu-r.1
for
123447292
hvu-r.1
for
123412778
hvu-r.1
for
123448313
sbi-r.1
for
8054122
sbi-r.1
for
8072884
sbi-r.1
for
8054263
bdi-r.1
for
100843222
bdi-r.1
for
100842583
bdi-r.1
for
100841981
cre-r.1
for
CHLRE_07g355500v5
cre-r.1
for
CHLRE_08g377550v5


Ortholog ID: 202
Species ath ath ath bra ghi ghi ghi cit cit cit gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre cre
Symbol AT4G27745 AT3G11230 AT3G08990 LOC103847029 LOC107890971 LOC107945732 LOC121215519 LOC102615140 LOC102627168 LOC102630210 LOC100813120 LOC100811789 LOC100265563 LOC100253807 LOC100249431 LOC7477829 LOC7474443 LOC11406673 LOC25484559 LOC25501219 LOC101248780 LOC101260555 LOC101267209 LOC102582035 LOC102584604 LOC107832354 LOC107823377 LOC107811612 LOC4343737 LOC4352226 LOC9270536 LOC100285476 LOC100285471 LOC100284017 LOC123044415 LOC123087184 LOC123412778 LOC123407553 LOC123425538 LOC8054122 LOC8072884 LOC8063262 LOC100843222 LOC100842583 LOC100838268 CHLRE_07g355500v5 CHLRE_08g377550v5
Function* Yippee family putative zinc-binding protein Yippee family putative zinc-binding protein Yippee family putative zinc-binding protein protein yippee-like At3g11230 protein yippee-like protein yippee-like At4g27745 protein yippee-like At4g27745 protein yippee-like At4g27745 protein yippee-like protein yippee-like At4g27745 protein yippee-like At5g53940 protein yippee-like At4g27745 protein yippee-like At4g27745 putative yippee-like protein Os10g0369500 protein yippee-like protein yippee-like At4g27745 protein yippee-like protein yippee-like protein yippee-like At4g27745 protein yippee-like At5g53940 protein yippee-like At4g27745 protein yippee-like At5g53940 protein yippee-like At4g27740 protein yippee-like protein yippee-like protein yippee-like At4g27745 protein yippee-like At4g27745 protein yippee-like putative yippee-like protein Os10g0369500 protein yippee-like At4g27745 putative yippee-like protein Os10g0369500 protein yippee-like uncharacterized LOC100285471 uncharacterized LOC100284017 putative yippee-like protein Os10g0369500 protein yippee-like protein yippee-like At4g27745 protein yippee-like At4g27745 putative yippee-like protein Os10g0369500 protein yippee-like protein yippee-like At3g55890 protein yippee-like At4g27745 protein yippee-like protein yippee-like At4g27745 putative yippee-like protein Os10g0369500 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00220 Arginine biosynthesis 6
ghi00250 Alanine, aspartate and glutamate metabolism 6
ghi00910 Nitrogen metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00051 Fructose and mannose metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi00190 Oxidative phosphorylation 3
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo03040 Spliceosome 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo04144 Endocytosis 2
ppo00330 Arginine and proline metabolism 2
ppo00710 Carbon fixation by Calvin cycle 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 5
mtr04517 IgSF CAM signaling 5
mtr04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta00062 Fatty acid elongation 2
nta01212 Fatty acid metabolism 2
nta04142 Lysosome 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 3
bdi04144 Endocytosis 2
bdi04145 Phagosome 2
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00920 Sulfur metabolism 3
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00908 Zeatin biosynthesis 2
bdi00270 Cysteine and methionine metabolism 2
bdi04122 Sulfur relay system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 3770406 820293 820051 103847029 107890971 107945732 121215519 102615140 102627168 102630210 100813120 100811789 100265563 100253807 100249431 7477829 7474443 11406673 25484559 25501219 101248780 101260555 101267209 102582035 102584604 107832354 107823377 107811612 4343737 4352226 9270536 100285476 100285471 100284017 123044415 123087184 123412778 123407553 123425538 8054122 8072884 8063262 100843222 100842583 100838268 5727584 5719917
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