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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G58620   zinc finger (CCCH-type) family protein 
 ath-r.7   AT5G58620   zinc finger (CCCH-type) family protein 
 ath-m.9   AT5G58620   zinc finger (CCCH-type) family protein 
 ath-e.2   AT5G58620   zinc finger (CCCH-type) family protein 
 ath-m.4.bio   AT5G58620   zinc finger (CCCH-type) family protein 
 ath-m.4.hor   AT5G58620   zinc finger (CCCH-type) family protein 
 ath-m.4.lig   AT5G58620   zinc finger (CCCH-type) family protein 
 ath-m.4.str   AT5G58620   zinc finger (CCCH-type) family protein 
 ath-m.4.tis   AT5G58620   zinc finger (CCCH-type) family protein 
 ath-u.5   CZF1   zinc finger (CCCH-type) family protein 
 ath-u.5   SZF1   salt-inducible zinc finger 1 
 gma-u.5   100795085   zinc finger CCCH domain-containing protein 66-like 
 gma-u.5   100787878   zinc finger CCCH domain-containing protein 66 
 gma-u.5   100812481   zinc finger CCCH domain-containing protein 29 
 vvi-u.5   100246707   zinc finger CCCH domain-containing protein 29 
 vvi-u.5   100265670   zinc finger CCCH domain-containing protein 66 
 ppo-u.5   7484914   zinc finger CCCH domain-containing protein 29 
 ppo-u.5   7490324   zinc finger CCCH domain-containing protein 29 
 ppo-u.5   18101417   zinc finger CCCH domain-containing protein 29 
 mtr-u.5   11415853   zinc finger CCCH domain-containing protein 29 
 mtr-u.5   11429482   zinc finger CCCH domain-containing protein 29 
 sly-u.5   101258155   zinc finger CCCH domain-containing protein 29 
 sly-u.5   101257277   zinc finger CCCH domain-containing protein 66 
 osa-u.5   4337692   zinc finger CCCH domain-containing protein 33-like 
 zma-u.5   100275781   uncharacterized LOC100275781 
 zma-u.5   103637295   zinc finger CCCH domain-containing protein 33 

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Top 50 coexpressed genes to AT5G58620 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G58620 (ath-u.5 coexpression data)

CoexMap"835976"


athAT5G58620 | Entrez gene ID : 835976      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 11 3 2 3 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0000932 [list] [network] P-body  (34 genes)  IDA  
GO:0010494 [list] [network] cytoplasmic stress granule  (143 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_200670.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  golg 1  (predict for NP_200670.1)
Subcellular
localization
TargetP
scret 5,  other 5  (predict for NP_200670.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G58620

.
ath-r.7
for
AT5G58620

.
ath-m.9
for
AT5G58620

.
ath-e.2
for
AT5G58620

.
ath-m.4.bio
for
AT5G58620

.
ath-m.4.hor
for
AT5G58620

.
ath-m.4.lig
for
AT5G58620

.
ath-m.4.str
for
AT5G58620

.
ath-m.4.tis
for
AT5G58620

.
ath-u.5
for
CZF1

.
ath-u.5
for
SZF1

.
gma-u.5
for
100795085

.
gma-u.5
for
100787878

.
gma-u.5
for
100812481

.
vvi-u.5
for
100246707

.
vvi-u.5
for
100265670

.
ppo-u.5
for
7484914

.
ppo-u.5
for
7490324

.
ppo-u.5
for
18101417

.
mtr-u.5
for
11415853

.
mtr-u.5
for
11429482

.
sly-u.5
for
101258155

.
sly-u.5
for
101257277

.
osa-u.5
for
4337692

.
zma-u.5
for
100275781

.
zma-u.5
for
103637295

.


Ortholog ID: 1965
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT5G58620 CZF1 LOC100783376 LOC100819521 LOC101257277 LOC101258155 LOC4337692 LOC103637295 LOC100275781 LOC103866976 LOC103845296 LOC100246707 LOC100265670 LOC7490324 LOC7481474 LOC11415853 LOC11429482 LOC123109020 LOC123189473 LOC123411913 LOC107954187 LOC121218574 LOC106445868 LOC106368121 LOC8071266 LOC102590659 LOC102582772 LOC102625565 LOC102627293 LOC100836455 LOC107811110 LOC107812954
Function* zinc finger (CCCH-type) family protein zinc finger (CCCH-type) family protein zinc finger CCCH domain-containing protein 29 zinc finger CCCH domain-containing protein 66 zinc finger CCCH domain-containing protein 66 zinc finger CCCH domain-containing protein 29 zinc finger CCCH domain-containing protein 33-like zinc finger CCCH domain-containing protein 33 uncharacterized LOC100275781 zinc finger CCCH domain-containing protein 29 zinc finger CCCH domain-containing protein 66 zinc finger CCCH domain-containing protein 29 zinc finger CCCH domain-containing protein 66 zinc finger CCCH domain-containing protein 29 zinc finger CCCH domain-containing protein 66 zinc finger CCCH domain-containing protein 29 zinc finger CCCH domain-containing protein 29 zinc finger CCCH domain-containing protein 33-like zinc finger CCCH domain-containing protein 33 zinc finger CCCH domain-containing protein 33-like zinc finger CCCH domain-containing protein 66 zinc finger CCCH domain-containing protein 29 zinc finger CCCH domain-containing protein 66-like zinc finger CCCH domain-containing protein 47-like zinc finger CCCH domain-containing protein 33 zinc finger CCCH domain-containing protein 66 zinc finger CCCH domain-containing protein 29-like zinc finger CCCH domain-containing protein 66 zinc finger CCCH domain-containing protein 29 zinc finger CCCH domain-containing protein 33 zinc finger CCCH domain-containing protein 66-like zinc finger CCCH domain-containing protein 29
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 3
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03040 Spliceosome 2
nta00052 Galactose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835976 818605 100783376 100819521 101257277 101258155 4337692 103637295 100275781 103866976 103845296 100246707 100265670 7490324 7481474 11415853 11429482 123109020 123189473 123411913 107954187 121218574 106445868 106368121 8071266 102590659 102582772 102625565 102627293 100836455 107811110 107812954
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