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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   HTB4   Histone superfamily protein 
 ath-r.7   HTB4   Histone superfamily protein 
 ath-m.9   HTB4   Histone superfamily protein 
 ath-e.2   HTB4   Histone superfamily protein 
 ath-m.4.bio   HTB4   Histone superfamily protein 
 ath-m.4.hor   HTB4   Histone superfamily protein 
 ath-m.4.lig   HTB4   Histone superfamily protein 
 ath-m.4.str   HTB4   Histone superfamily protein 
 ath-m.4.tis   HTB4   Histone superfamily protein 
 ath-u.5   HTB9   Histone superfamily protein 
 ath-u.5   HTB1   Histone superfamily protein 
 gma-u.5   100805396   probable histone H2B.3 
 gma-u.5   100806140   probable histone H2B.3 
 gma-u.5   100817849   probable histone H2B.1 
 vvi-u.5   100263369   histone H2B.3 
 vvi-u.5   100251955   probable histone H2B.1-like 
 ppo-u.5   18097592   histone H2B 
 ppo-u.5   18101997   histone H2B 
 mtr-u.5   11431194   probable histone H2B.3 
 mtr-u.5   25492556   probable histone H2B.1 
 mtr-u.5   11442767   probable histone H2B.1 
 sly-u.5   101245134   histone H2B-like 
 sly-u.5   101253792   probable histone H2B.1 
 sly-u.5   H2B-3   histone H2B.3 
 osa-u.5   9268195   uncharacterized LOC9268195 
 osa-u.5   4324504   histone H2B.5 
 osa-u.5   107278608   histone H2B.1 
 zma-u.5   100501458   Histone H2B 
 zma-u.5   100501306   Histone H2B 
 zma-u.5   100274083   uncharacterized LOC100274083 

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Top 50 coexpressed genes to HTB4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to HTB4 (ath-u.5 coexpression data)

CoexMap"836113"


athHTB4 | Entrez gene ID : 836113    
Species ath gma vvi ppo mtr sly osa zma nta bna tae bdi sot bra sbi hvu cit cre ghi
Paralog 11 3 2 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (394 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_200799.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_200799.1)
Subcellular
localization
TargetP
other 9  (predict for NP_200799.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
HTB4

.
ath-r.7
for
HTB4

.
ath-m.9
for
HTB4

.
ath-e.2
for
HTB4

.
ath-m.4.bio
for
HTB4

.
ath-m.4.hor
for
HTB4

.
ath-m.4.lig
for
HTB4

.
ath-m.4.str
for
HTB4

.
ath-m.4.tis
for
HTB4

.
ath-u.5
for
HTB9

.
ath-u.5
for
HTB1

.
gma-u.5
for
100805396

.
gma-u.5
for
100806140

.
gma-u.5
for
100817849

.
vvi-u.5
for
100263369

.
vvi-u.5
for
100251955

.
ppo-u.5
for
18097592

.
ppo-u.5
for
18101997

.
mtr-u.5
for
11431194

.
mtr-u.5
for
25492556

.
mtr-u.5
for
11442767

.
sly-u.5
for
101245134

.
sly-u.5
for
101253792

.
sly-u.5
for
H2B-3

.
osa-u.5
for
9268195

.
osa-u.5
for
4324504

.
osa-u.5
for
107278608

.
zma-u.5
for
100501458

.
zma-u.5
for
100501306

.
zma-u.5
for
100274083

.


Ortholog ID: 42
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sot sot cit bdi bdi nta nta
Symbol AT2G28720 HTB4 LOC100805396 LOC100499734 H2B-1 LOC101267024 LOC107278608 LOC4345904 LOC103639304 LOC103647254 LOC103829764 LOC103841289 LOC100251955 LOC100263369 LOC25485824 LOC25492748 LOC543489 LOC123143170 LOC123451652 LOC123442703 LOC107948824 LOC107963943 LOC106440705 LOC106405890 CHLRE_17g711750v5 CHLRE_17g713450v5 LOC8072250 LOC102590470 LOC102601239 LOC102624126 LOC100823811 LOC100829959 LOC107777582 LOC107790383
Function* Histone superfamily protein Histone superfamily protein probable histone H2B.3 probable histone H2B.3 histone H2B histone H2B.3-like histone H2B.1 histone H2B.2-like histone H2B.1-like histone H2B.5 histone H2B.3 histone H2B.8 probable histone H2B.1-like histone H2B.3 probable histone H2B.3 probable histone H2B.2 histone H2B.1-like histone H2B.3-like histone H2B.4-like histone H2B.4-like histone H2B-like histone H2B-like histone H2B.8 histone H2B.7 uncharacterized protein uncharacterized protein histone H2B.1 histone H2B-like histone H2B histone H2B.4 histone H2B.1 histone H2B.1 histone H2B.3 histone H2B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa00480 Glutathione metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi00240 Pyrimidine metabolism 2
sbi00480 Glutathione metabolism 2
sbi01232 Nucleotide metabolism 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817421 836113 100805396 100499734 778282 101267024 107278608 4345904 103639304 103647254 103829764 103841289 100251955 100263369 25485824 25492748 543489 123143170 123451652 123442703 107948824 107963943 106440705 106405890 66056963 5725960 8072250 102590470 102601239 102624126 100823811 100829959 107777582 107790383
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