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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G60190   Cysteine proteinases superfamily protein 
 ath-r.7   AT5G60190   Cysteine proteinases superfamily protein 
 ath-m.9   AT5G60190   Cysteine proteinases superfamily protein 
 ath-e.2   AT5G60190   Cysteine proteinases superfamily protein 
 ath-m.4.bio   AT5G60190   Cysteine proteinases superfamily protein 
 ath-m.4.hor   AT5G60190   Cysteine proteinases superfamily protein 
 ath-m.4.lig   AT5G60190   Cysteine proteinases superfamily protein 
 ath-m.4.str   AT5G60190   Cysteine proteinases superfamily protein 
 ath-m.4.tis   AT5G60190   Cysteine proteinases superfamily protein 
 gma-u.5   100800268   NEDD8-specific protease 1-like 
 vvi-u.5   104879564   NEDD8-specific protease 1 
 ppo-u.5   7478874   NEDD8-specific protease 1 
 mtr-u.5   11408023   NEDD8-specific protease 1 
 sly-u.5   101249546   NEDD8-specific protease 1 
 osa-u.5   4349534   uncharacterized LOC4349534 
 osa-u.5   4351243   uncharacterized LOC4351243 
 zma-u.5   103641153   NEDD8-specific protease 1 

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Top 50 coexpressed genes to AT5G60190 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G60190 (ath-u.5 coexpression data)

CoexMap"836141"


athAT5G60190 | Entrez gene ID : 836141      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (361 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0019784 [list] [network] deNEDDylase activity  (1 genes)  IDA  
Protein NP_200827.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  cyto_plas 3  (predict for NP_200827.1)
Subcellular
localization
TargetP
other 9  (predict for NP_200827.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G60190

.
ath-r.7
for
AT5G60190

.
ath-m.9
for
AT5G60190

.
ath-e.2
for
AT5G60190

.
ath-m.4.bio
for
AT5G60190

.
ath-m.4.hor
for
AT5G60190

.
ath-m.4.lig
for
AT5G60190

.
ath-m.4.str
for
AT5G60190

.
ath-m.4.tis
for
AT5G60190

.
gma-u.5
for
100800268

.
vvi-u.5
for
104879564

.
ppo-u.5
for
7478874

.
mtr-u.5
for
11408023

.
sly-u.5
for
101249546

.
osa-u.5
for
4349534

.
osa-u.5
for
4351243

.
zma-u.5
for
103641153

.


Ortholog ID: 8662
Species ath gma sly osa zma bra bra vvi ppo mtr tae ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G60190 LOC100800268 LOC101249546 LOC4351243 LOC103641153 LOC103845432 LOC103856581 LOC104879564 LOC7478874 LOC11408023 LOC123103252 LOC121217636 LOC107959256 LOC106413968 LOC106419663 CHLRE_01g055050v5 LOC8072154 LOC102591038 LOC102628280 LOC104584815 LOC107784714 LOC107762236
Function* Cysteine proteinases superfamily protein NEDD8-specific protease 1-like NEDD8-specific protease 1 uncharacterized LOC4351243 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 WRKY transcription factor 44 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 uncharacterized protein uncharacterized LOC8072154 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1-like NEDD8-specific protease 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly03008 Ribosome biogenesis in eukaryotes 3
sly03083 Polycomb repressive complex 3
sly04712 Circadian rhythm - plant 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra01240 Biosynthesis of cofactors 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836141 100800268 101249546 4351243 103641153 103845432 103856581 104879564 7478874 11408023 123103252 121217636 107959256 106413968 106419663 5725777 8072154 102591038 102628280 104584815 107784714 107762236
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