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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G65540   transcription initiation factor TFIID subunit 
 ath-r.7   AT5G65540   transcription initiation factor TFIID subunit 
 ath-m.9   AT5G65540   transcription initiation factor TFIID subunit 
 ath-e.2   AT5G65540   transcription initiation factor TFIID subunit 
 ath-m.4.bio   AT5G65540   transcription initiation factor TFIID subunit 
 ath-m.4.hor   AT5G65540   transcription initiation factor TFIID subunit 
 ath-m.4.lig   AT5G65540   transcription initiation factor TFIID subunit 
 ath-m.4.str   AT5G65540   transcription initiation factor TFIID subunit 
 ath-m.4.tis   AT5G65540   transcription initiation factor TFIID subunit 
 bra-r.6   103873992   uncharacterized LOC103873992 
 bna-r.1   106431889   uncharacterized LOC106431889 
 bna-r.1   106348118   uncharacterized LOC106348118 
 ghi-r.1   107924274   uncharacterized LOC107924274 
 ghi-r.1   107945420   uncharacterized LOC107945420 
 cit-r.1   102616625   hypothetical protein 
 gma-u.5   100801442   uncharacterized LOC100801442 
 gma-u.5   100776834   uncharacterized LOC100776834 
 vvi-u.5   100241274   uncharacterized LOC100241274 
 ppo-u.5   7480184   uncharacterized LOC7480184 
 mtr-u.5   11407034   uncharacterized LOC11407034 
 sly-u.5   101259248   uncharacterized LOC101259248 
 sot-r.1   102599217   histone-lysine N-methyltransferase 2D 
 nta-r.1   107760146   uncharacterized LOC107760146 
 osa-u.5   4334465   uncharacterized LOC4334465 
 zma-u.5   100194043   uncharacterized LOC100194043 
 tae-r.2   123123270   uncharacterized LOC123123270 
 tae-r.2   123113784   involucrin 
 tae-r.2   123105487   uncharacterized LOC123105487 
 hvu-r.1   123452794   uncharacterized LOC123452794 
 sbi-r.1   8081226   uncharacterized LOC8081226 
 bdi-r.1   100821232   transcription factor SPT20 

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Top 50 coexpressed genes to AT5G65540 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G65540 (ath-u.5 coexpression data)

CoexMap"836680"


athAT5G65540 | Entrez gene ID : 836680      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 1 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046982 [list] [network] protein heterodimerization activity  (86 genes)  IEA  
Protein NP_201357.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  cysk 1  (predict for NP_201357.2)
Subcellular
localization
TargetP
other 8  (predict for NP_201357.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G65540
ath-r.7
for
AT5G65540
ath-m.9
for
AT5G65540
ath-e.2
for
AT5G65540
ath-m.4.bio
for
AT5G65540
ath-m.4.hor
for
AT5G65540
ath-m.4.lig
for
AT5G65540
ath-m.4.str
for
AT5G65540
ath-m.4.tis
for
AT5G65540
bra-r.6
for
103873992
bna-r.1
for
106431889
bna-r.1
for
106348118
ghi-r.1
for
107924274
ghi-r.1
for
107945420
cit-r.1
for
102616625
gma-u.5
for
100801442
gma-u.5
for
100776834
vvi-u.5
for
100241274
ppo-u.5
for
7480184
mtr-u.5
for
11407034
sly-u.5
for
101259248
sot-r.1
for
102599217
nta-r.1
for
107760146
osa-u.5
for
4334465
zma-u.5
for
100194043
tae-r.2
for
123123270
tae-r.2
for
123113784
tae-r.2
for
123105487
hvu-r.1
for
123452794
sbi-r.1
for
8081226
bdi-r.1
for
100821232


Ortholog ID: 10420
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G65540 LOC103873992 LOC106431889 LOC106348118 LOC107924274 LOC107945420 LOC102616625 LOC100801442 LOC100776834 LOC100241274 LOC7480184 LOC11407034 LOC101259248 LOC102599217 LOC107760146 LOC4334465 LOC100194043 LOC123123270 LOC123113784 LOC123080134 LOC123452794 LOC8081226 LOC100821232
Function* transcription initiation factor TFIID subunit uncharacterized LOC103873992 uncharacterized LOC106431889 uncharacterized LOC106348118 uncharacterized LOC107924274 uncharacterized LOC107945420 hypothetical protein uncharacterized LOC100801442 uncharacterized LOC100776834 uncharacterized LOC100241274 uncharacterized LOC7480184 uncharacterized LOC11407034 uncharacterized LOC101259248 histone-lysine N-methyltransferase 2D uncharacterized LOC107760146 uncharacterized LOC4334465 uncharacterized LOC100194043 uncharacterized LOC123123270 involucrin G-box-binding factor uncharacterized LOC123452794 uncharacterized LOC8081226 transcription factor SPT20
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03018 RNA degradation 2
bna03250 Viral life cycle - HIV-1 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo03250 Viral life cycle - HIV-1 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 3
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836680 103873992 106431889 106348118 107924274 107945420 102616625 100801442 100776834 100241274 7480184 11407034 101259248 102599217 107760146 4334465 100194043 123123270 123113784 123080134 123452794 8081226 100821232
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