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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ATRX   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-r.7   ATRX   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.9   ATRX   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-e.2   ATRX   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.bio   ATRX   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.hor   ATRX   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.lig   ATRX   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.str   ATRX   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.tis   ATRX   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 bra-r.6   103871701   protein CHROMATIN REMODELING 20 
 bna-r.1   106415314   protein CHROMATIN REMODELING 20-like 
 bna-r.1   106346321   protein CHROMATIN REMODELING 20 
 ghi-r.1   107951839   protein CHROMATIN REMODELING 20 
 ghi-r.1   107928742   protein CHROMATIN REMODELING 20 
 cit-r.1   102609504   protein CHROMATIN REMODELING 20 
 gma-u.5   100818409   protein CHROMATIN REMODELING 20 
 gma-u.5   100794911   protein CHROMATIN REMODELING 20 
 vvi-u.5   100244360   protein CHROMATIN REMODELING 20 
 ppo-u.5   7487714   protein CHROMATIN REMODELING 20-like 
 ppo-u.5   7453540   protein CHROMATIN REMODELING 20 
 mtr-u.5   11411043   protein CHROMATIN REMODELING 20 
 sly-u.5   101246047   protein CHROMATIN REMODELING 20 
 sot-r.1   102604570   protein CHROMATIN REMODELING 20 
 nta-r.1   107795885   protein CHROMATIN REMODELING 20 
 nta-r.1   107813964   protein CHROMATIN REMODELING 20 
 osa-u.5   4348805   protein CHROMATIN REMODELING 20 
 zma-u.5   100126928   uncharacterized LOC100126928 
 tae-r.2   123180964   protein CHROMATIN REMODELING 20 
 tae-r.2   123119656   protein CHROMATIN REMODELING 20 
 tae-r.2   123044747   protein CHROMATIN REMODELING 20 
 hvu-r.1   123430194   protein CHROMATIN REMODELING 20 
 sbi-r.1   8059275   protein CHROMATIN REMODELING 20 
 bdi-r.1   100835235   protein CHROMATIN REMODELING 20 

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Top 50 coexpressed genes to ATRX (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ATRX (ath-u.5 coexpression data)

CoexMap"837382"


athATRX | Entrez gene ID : 837382      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043007 [list] [network] maintenance of rDNA  (3 genes)  IMP  
GO:0009555 [list] [network] pollen development  (385 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0140713 [list] [network] histone chaperone activity  (2 genes)  IMP  
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (21 genes)  IEA  
GO:0042393 [list] [network] histone binding  (50 genes)  IPI  
GO:0016887 [list] [network] ATP hydrolysis activity  (205 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (321 genes)  IEA  
Protein NP_001184937.1 [sequence] [blastp]
NP_001184938.1 [sequence] [blastp]
NP_001184939.1 [sequence] [blastp]
NP_172336.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001184937.1)
nucl 8,  cyto 1  (predict for NP_001184938.1)
nucl 8,  cyto 1  (predict for NP_001184939.1)
nucl 8,  cyto 1  (predict for NP_172336.4)
Subcellular
localization
TargetP
other 8  (predict for NP_001184937.1)
other 8  (predict for NP_001184938.1)
other 8  (predict for NP_001184939.1)
other 8  (predict for NP_172336.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ATRX
ath-r.7
for
ATRX
ath-m.9
for
ATRX
ath-e.2
for
ATRX
ath-m.4.bio
for
ATRX
ath-m.4.hor
for
ATRX
ath-m.4.lig
for
ATRX
ath-m.4.str
for
ATRX
ath-m.4.tis
for
ATRX
bra-r.6
for
103871701
bna-r.1
for
106415314
bna-r.1
for
106346321
ghi-r.1
for
107951839
ghi-r.1
for
107928742
cit-r.1
for
102609504
gma-u.5
for
100818409
gma-u.5
for
100794911
vvi-u.5
for
100244360
ppo-u.5
for
7487714
ppo-u.5
for
7453540
mtr-u.5
for
11411043
sly-u.5
for
101246047
sot-r.1
for
102604570
nta-r.1
for
107795885
nta-r.1
for
107813964
osa-u.5
for
4348805
zma-u.5
for
100126928
tae-r.2
for
123180964
tae-r.2
for
123119656
tae-r.2
for
123044747
hvu-r.1
for
123430194
sbi-r.1
for
8059275
bdi-r.1
for
100835235


Ortholog ID: 10436
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol ATRX LOC103871701 LOC106415314 LOC106346321 LOC107951839 LOC107928742 LOC102609504 LOC100818409 LOC100794911 LOC100244360 LOC7487714 LOC7453540 LOC11411043 LOC101246047 LOC102604570 LOC107795885 LOC107813964 LOC4348805 LOC100126928 LOC123180964 LOC123119656 LOC123044747 LOC123430194 LOC8059275 LOC100835235
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20-like protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20-like protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 uncharacterized LOC100126928 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20 protein CHROMATIN REMODELING 20
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03082 ATP-dependent chromatin remodeling 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04145 Phagosome 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04145 Phagosome 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
ppo03082 ATP-dependent chromatin remodeling 2
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo00310 Lysine degradation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03082 ATP-dependent chromatin remodeling 2
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03040 Spliceosome 3
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837382 103871701 106415314 106346321 107951839 107928742 102609504 100818409 100794911 100244360 7487714 7453540 11411043 101246047 102604570 107795885 107813964 4348805 100126928 123180964 123119656 123044747 123430194 8059275 100835235
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