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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G22630   SSUH2-like protein 
 ath-r.7   AT1G22630   SSUH2-like protein 
 ath-m.9   AT1G22630   SSUH2-like protein 
 ath-e.2   AT1G22630   SSUH2-like protein 
 ath-m.4.bio   AT1G22630   SSUH2-like protein 
 ath-m.4.hor   AT1G22630   SSUH2-like protein 
 ath-m.4.lig   AT1G22630   SSUH2-like protein 
 ath-m.4.str   AT1G22630   SSUH2-like protein 
 ath-m.4.tis   AT1G22630   SSUH2-like protein 
 bra-r.6   103835693   uncharacterized LOC103835693 
 bna-r.1   106434188   uncharacterized LOC106434188 
 bna-r.1   106425914   uncharacterized LOC106425914 
 ghi-r.1   107961217   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ghi-r.1   107903115   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 gma-u.5   100305840   uncharacterized LOC100305840 
 ppo-u.5   18104411   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 mtr-u.5   25491766   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sly-u.5   101256243   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sot-r.1   102597747   protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic 
 nta-r.1   107813195   uncharacterized LOC107813195 
 nta-r.1   107812933   uncharacterized LOC107812933 
 osa-u.5   9266978   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 zma-u.5   100278105   uncharacterized LOC100278105 
 tae-r.2   123103334   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 tae-r.2   123179834   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 tae-r.2   123185369   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 hvu-r.1   123426688   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sbi-r.1   8066600   protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic 
 bdi-r.1   100834407   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 

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Top 50 coexpressed genes to AT1G22630 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G22630 (ath-u.5 coexpression data)

CoexMap"838869"


athAT1G22630 | Entrez gene ID : 838869      
Species ath bra bna ghi gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi cit
Paralog 9 1 2 2 1 1 1 1 1 2 1 1 3 1 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO MF
Protein NP_564175.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  extr 2  (predict for NP_564175.2)
Subcellular
localization
TargetP
scret 4,  other 3  (predict for NP_564175.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G22630
ath-r.7
for
AT1G22630
ath-m.9
for
AT1G22630
ath-e.2
for
AT1G22630
ath-m.4.bio
for
AT1G22630
ath-m.4.hor
for
AT1G22630
ath-m.4.lig
for
AT1G22630
ath-m.4.str
for
AT1G22630
ath-m.4.tis
for
AT1G22630
bra-r.6
for
103835693
bna-r.1
for
106434188
bna-r.1
for
106425914
ghi-r.1
for
107961217
ghi-r.1
for
107903115
gma-u.5
for
100305840
ppo-u.5
for
18104411
mtr-u.5
for
25491766
sly-u.5
for
101256243
sot-r.1
for
102597747
nta-r.1
for
107813195
nta-r.1
for
107812933
osa-u.5
for
9266978
zma-u.5
for
100278105
tae-r.2
for
123103334
tae-r.2
for
123179834
tae-r.2
for
123185369
hvu-r.1
for
123426688
sbi-r.1
for
8066600
bdi-r.1
for
100834407


Ortholog ID: 12026
Species ath bra bna bna ghi ghi gma ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT1G22630 LOC103835693 LOC106434188 LOC106425914 LOC107961217 LOC107903115 LOC100305840 LOC18104411 LOC25491766 LOC101256243 LOC102597747 LOC107813195 LOC107812933 LOC9266978 LOC100278105 LOC123103334 LOC123179834 LOC123185369 LOC123426688 LOC8066600 LOC100834407
Function* SSUH2-like protein uncharacterized LOC103835693 uncharacterized LOC106434188 uncharacterized LOC106425914 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized LOC100305840 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic uncharacterized LOC107813195 uncharacterized LOC107812933 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized LOC100278105 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 5
ghi00710 Carbon fixation by Calvin cycle 4
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00906 Carotenoid biosynthesis 2
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00710 Carbon fixation by Calvin cycle 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma01200 Carbon metabolism 3
gma00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 6
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00710 Carbon fixation by Calvin cycle 3
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00030 Pentose phosphate pathway 2
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
sot00195 Photosynthesis 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 8
nta01200 Carbon metabolism 8
nta04146 Peroxisome 6
nta00260 Glycine, serine and threonine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 4
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 10
tae01200 Carbon metabolism 9
tae00710 Carbon fixation by Calvin cycle 6
tae00260 Glycine, serine and threonine metabolism 5
tae01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 12
tae01200 Carbon metabolism 9
tae00710 Carbon fixation by Calvin cycle 6
tae00260 Glycine, serine and threonine metabolism 6
tae01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838869 103835693 106434188 106425914 107961217 107903115 100305840 18104411 25491766 101256243 102597747 107813195 107812933 9266978 100278105 123103334 123179834 123185369 123426688 8066600 100834407
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