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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   IAR4   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 ath-r.7   IAR4   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 ath-m.9   IAR4   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 ath-e.2   IAR4   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 ath-m.4.bio   IAR4   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 ath-m.4.hor   IAR4   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 ath-m.4.lig   IAR4   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 ath-m.4.str   IAR4   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 ath-m.4.tis   IAR4   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 ath-u.5   E1 ALPHA   pyruvate dehydrogenase complex E1 alpha subunit 
 gma-u.5   100781250   pyruvate dehydrogenase E1 component subunit alpha, mitochondrial 
 gma-u.5   100816737   pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial 
 gma-u.5   100813933   pyruvate dehydrogenase E1 component subunit alpha, mitochondrial 
 vvi-u.5   100243322   pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like 
 vvi-u.5   100263880   pyruvate dehydrogenase E1 component subunit alpha, mitochondrial 
 ppo-u.5   7469071   pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial 
 ppo-u.5   7460794   pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial 
 mtr-u.5   11416624   pyruvate dehydrogenase E1 component subunit alpha, mitochondrial 
 mtr-u.5   11414398   pyruvate dehydrogenase E1 component subunit alpha, mitochondrial 
 sly-u.5   101258551   pyruvate dehydrogenase E1 component subunit alpha, mitochondrial 
 sly-u.5   543639   pyruvate dehydrogenase E1 component subunit alpha, mitochondrial 
 osa-u.5   4340640   pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial-like 
 osa-u.5   4330673   pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial-like 
 zma-u.5   100283889   pyruvate dehydrogenase E1 component alpha subunit 
 zma-u.5   100272256   uncharacterized LOC100272256 
 zma-u.5   732791   pyruvate dehydrogenase 1 

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Top 50 coexpressed genes to IAR4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to IAR4 (ath-u.5 coexpression data)

CoexMap"839031"


athIAR4 | Entrez gene ID : 839031      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 10 3 2 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
ath00020 [list] [network] Citrate cycle (TCA cycle) (64 genes)
ath00620 [list] [network] Pyruvate metabolism (97 genes)
ath00785 [list] [network] Lipoic acid metabolism (36 genes)
ath01200 [list] [network] Carbon metabolism (275 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (103 genes)
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0050897 [list] [network] cobalt ion binding  (44 genes)  HDA  
GO:0008270 [list] [network] zinc ion binding  (391 genes)  HDA  
Protein NP_173828.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 4,  cyto_mito 3  (predict for NP_173828.1)
Subcellular
localization
TargetP
mito 6,  chlo 5  (predict for NP_173828.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
IAR4

.
ath-r.7
for
IAR4

.
ath-m.9
for
IAR4

.
ath-e.2
for
IAR4

.
ath-m.4.bio
for
IAR4

.
ath-m.4.hor
for
IAR4

.
ath-m.4.lig
for
IAR4

.
ath-m.4.str
for
IAR4

.
ath-m.4.tis
for
IAR4

.
ath-u.5
for
E1 ALPHA

.
gma-u.5
for
100781250

.
gma-u.5
for
100816737

.
gma-u.5
for
100813933

.
vvi-u.5
for
100243322

.
vvi-u.5
for
100263880

.
ppo-u.5
for
7469071

.
ppo-u.5
for
7460794

.
mtr-u.5
for
11416624

.
mtr-u.5
for
11414398

.
sly-u.5
for
101258551

.
sly-u.5
for
543639

.
osa-u.5
for
4340640

.
osa-u.5
for
4330673

.
zma-u.5
for
100283889

.
zma-u.5
for
100272256

.
zma-u.5
for
732791

.


Ortholog ID: 3054
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol E1 ALPHA IAR4 LOC100816737 LOC100813933 LOC101258551 LOC543639 LOC4340640 LOC4330673 LOC732791 LOC100272256 LOC103831554 LOC103829344 LOC100243322 LOC100263880 LOC7469071 LOC7460794 LOC11416624 LOC11414398 LOC123145538 LOC123128418 LOC123410608 LOC123401669 LOC107886628 LOC107903690 LOC106450194 LOC106376756 CHLRE_07g337650v5 LOC8065712 LOC8075734 LOC102594416 PDHE1-A LOC102613187 LOC100841947 LOC107760137 LOC107814677
Function* pyruvate dehydrogenase complex E1 alpha subunit thiamine diphosphate-binding fold (THDP-binding) superfamily protein pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial-like pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial-like pyruvate dehydrogenase 1 uncharacterized LOC100272256 pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like pyruvate dehydrogenase E1 component subunit alpha, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial uncharacterized protein pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like pyruvate dehydrogenase E1 component subunit alpha, mitochondrial pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00620 Pyruvate metabolism 2
ath00670 One carbon pool by folate 2
ath01240 Biosynthesis of cofactors 2
ath00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00020 Citrate cycle (TCA cycle) 13
ath01200 Carbon metabolism 13
ath01210 2-Oxocarboxylic acid metabolism 12
ath00785 Lipoic acid metabolism 7
ath01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 9
gma00020 Citrate cycle (TCA cycle) 7
gma01200 Carbon metabolism 7
gma00010 Glycolysis / Gluconeogenesis 3
gma00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00020 Citrate cycle (TCA cycle) 8
gma01200 Carbon metabolism 8
gma01210 2-Oxocarboxylic acid metabolism 8
gma00785 Lipoic acid metabolism 6
gma00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 3
sly04141 Protein processing in endoplasmic reticulum 3
sly00510 N-Glycan biosynthesis 2
sly00020 Citrate cycle (TCA cycle) 2
sly00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 8
sly00020 Citrate cycle (TCA cycle) 6
sly01210 2-Oxocarboxylic acid metabolism 5
sly00785 Lipoic acid metabolism 3
sly00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 6
osa00020 Citrate cycle (TCA cycle) 5
osa01210 2-Oxocarboxylic acid metabolism 5
osa00190 Oxidative phosphorylation 4
osa01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 13
zma01200 Carbon metabolism 13
zma01210 2-Oxocarboxylic acid metabolism 9
zma00640 Propanoate metabolism 6
zma00785 Lipoic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00010 Glycolysis / Gluconeogenesis 2
zma00020 Citrate cycle (TCA cycle) 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 5
bra01310 Nitrogen cycle 5
bra01200 Carbon metabolism 3
bra00030 Pentose phosphate pathway 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 3
bra00190 Oxidative phosphorylation 3
bra01200 Carbon metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 5
vvi00020 Citrate cycle (TCA cycle) 5
vvi01200 Carbon metabolism 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00020 Citrate cycle (TCA cycle) 6
vvi01200 Carbon metabolism 6
vvi00190 Oxidative phosphorylation 6
vvi01210 2-Oxocarboxylic acid metabolism 4
vvi00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 10
ppo00510 N-Glycan biosynthesis 3
ppo00190 Oxidative phosphorylation 2
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 8
ppo01200 Carbon metabolism 6
ppo00020 Citrate cycle (TCA cycle) 5
ppo00010 Glycolysis / Gluconeogenesis 4
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 11
mtr00020 Citrate cycle (TCA cycle) 9
mtr01210 2-Oxocarboxylic acid metabolism 7
mtr01230 Biosynthesis of amino acids 7
mtr00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 7
mtr04145 Phagosome 7
mtr04142 Lysosome 4
mtr04626 Plant-pathogen interaction 3
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 7
tae00020 Citrate cycle (TCA cycle) 6
tae01210 2-Oxocarboxylic acid metabolism 6
tae00620 Pyruvate metabolism 4
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 9
tae00020 Citrate cycle (TCA cycle) 6
tae01210 2-Oxocarboxylic acid metabolism 6
tae00620 Pyruvate metabolism 6
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 8
hvu00020 Citrate cycle (TCA cycle) 6
hvu00010 Glycolysis / Gluconeogenesis 6
hvu01210 2-Oxocarboxylic acid metabolism 5
hvu01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00620 Pyruvate metabolism 6
ghi00020 Citrate cycle (TCA cycle) 6
ghi01210 2-Oxocarboxylic acid metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00620 Pyruvate metabolism 6
ghi00020 Citrate cycle (TCA cycle) 6
ghi01210 2-Oxocarboxylic acid metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 7
cre01210 2-Oxocarboxylic acid metabolism 7
cre00220 Arginine biosynthesis 5
cre01200 Carbon metabolism 5
cre00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 9
sbi00020 Citrate cycle (TCA cycle) 4
sbi01200 Carbon metabolism 4
sbi00620 Pyruvate metabolism 3
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 7
sot00020 Citrate cycle (TCA cycle) 3
sot01200 Carbon metabolism 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00020 Citrate cycle (TCA cycle) 7
cit01200 Carbon metabolism 7
cit01210 2-Oxocarboxylic acid metabolism 6
cit00190 Oxidative phosphorylation 5
cit00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 8
bdi00020 Citrate cycle (TCA cycle) 7
bdi00190 Oxidative phosphorylation 6
bdi00620 Pyruvate metabolism 4
bdi01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 4
nta00020 Citrate cycle (TCA cycle) 4
nta00620 Pyruvate metabolism 4
nta00785 Lipoic acid metabolism 4
nta01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 4
nta00020 Citrate cycle (TCA cycle) 4
nta00620 Pyruvate metabolism 4
nta00785 Lipoic acid metabolism 4
nta01200 Carbon metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842284 839031 100816737 100813933 101258551 543639 4340640 4330673 732791 100272256 103831554 103829344 100243322 100263880 7469071 7460794 11416624 11414398 123145538 123128418 123410608 123401669 107886628 107903690 106450194 106376756 5725660 8065712 8075734 102594416 102583771 102613187 100841947 107760137 107814677
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