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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G29240   transcription initiation factor TFIID subunit, putative (DUF688) 
 ath-r.7   AT1G29240   transcription initiation factor TFIID subunit, putative (DUF688) 
 ath-m.9   AT1G29240   transcription initiation factor TFIID subunit, putative (DUF688) 
 ath-e.2   AT1G29240   transcription initiation factor TFIID subunit, putative (DUF688) 
 ath-m.4.bio   AT1G29240   transcription initiation factor TFIID subunit, putative (DUF688) 
 ath-m.4.hor   AT1G29240   transcription initiation factor TFIID subunit, putative (DUF688) 
 ath-m.4.lig   AT1G29240   transcription initiation factor TFIID subunit, putative (DUF688) 
 ath-m.4.str   AT1G29240   transcription initiation factor TFIID subunit, putative (DUF688) 
 ath-m.4.tis   AT1G29240   transcription initiation factor TFIID subunit, putative (DUF688) 
 ath-u.5   AT2G34170   hypothetical protein (DUF688) 
 bra-r.6   103828973   uncharacterized LOC103828973 
 bra-r.6   103835287   uncharacterized LOC103835287 
 bna-r.1   BNACNNG41430D   uncharacterized BNACNNG41430D 
 bna-r.1   106411795   uncharacterized LOC106411795 
 bna-r.1   106399492   uncharacterized LOC106399492 

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Top 50 coexpressed genes to AT1G29240 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G29240 (ath-u.5 coexpression data)

CoexMap"839798"


athAT1G29240 | Entrez gene ID : 839798      
Species ath bra bna cre vvi ppo mtr hvu tae osa gma zma sly ghi cit sbi nta bdi sot
Paralog 10 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_174218.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_174218.2)
Subcellular
localization
TargetP
mito 5  (predict for NP_174218.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G29240
ath-r.7
for
AT1G29240
ath-m.9
for
AT1G29240
ath-e.2
for
AT1G29240
ath-m.4.bio
for
AT1G29240
ath-m.4.hor
for
AT1G29240
ath-m.4.lig
for
AT1G29240
ath-m.4.str
for
AT1G29240
ath-m.4.tis
for
AT1G29240
ath-u.5
for
AT2G34170
bra-r.6
for
103828973
bra-r.6
for
103835287
bna-r.1
for
BNACNNG41430D
bna-r.1
for
106411795
bna-r.1
for
106399492


Ortholog ID: 14346
Species ath ath bra bra bna bna bna
Symbol AT1G29240 AT2G34170 LOC103828973 LOC103835287 BNACNNG41430D LOC106399492 LOC111197969
Function* transcription initiation factor TFIID subunit, putative (DUF688) hypothetical protein (DUF688) uncharacterized LOC103828973 uncharacterized LOC103835287 uncharacterized BNACNNG41430D uncharacterized LOC106399492 uncharacterized LOC111197969
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 7
bna00062 Fatty acid elongation 5
bna00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 7
bna00062 Fatty acid elongation 5
bna00071 Fatty acid degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839798 817978 103828973 103835287 106451209 106399492 111197969
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