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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TOM2A   tobamovirus multiplication 2A 
 ath-r.7   TOM2A   tobamovirus multiplication 2A 
 ath-m.9   TOM2A   tobamovirus multiplication 2A 
 ath-e.2   TOM2A   tobamovirus multiplication 2A 
 ath-m.4.bio   TOM2A   tobamovirus multiplication 2A 
 ath-m.4.hor   TOM2A   tobamovirus multiplication 2A 
 ath-m.4.lig   TOM2A   tobamovirus multiplication 2A 
 ath-m.4.str   TOM2A   tobamovirus multiplication 2A 
 ath-m.4.tis   TOM2A   tobamovirus multiplication 2A 
 bra-r.6   103840163   tobamovirus multiplication protein 2A 
 bra-r.6   103874745   tobamovirus multiplication protein 2A 
 bna-r.1   125608739   tobamovirus multiplication protein 2A-like 
 bna-r.1   106361645   tobamovirus multiplication protein 2A 
 bna-r.1   106367133   tobamovirus multiplication protein 2A 
 ghi-r.1   121211111   tobamovirus multiplication protein 2A 
 ghi-r.1   107946724   tobamovirus multiplication protein 2A 
 ghi-r.1   107933567   tobamovirus multiplication protein 2A 
 cit-r.1   102607083   tobamovirus multiplication protein 2A 
 gma-u.5   547883   tobamovirus multiplication protein 2A 
 gma-u.5   100815033   tobamovirus multiplication protein 2A 
 gma-u.5   100793680   tetraspanin domain-containing protein 
 vvi-u.5   100245417   tobamovirus multiplication protein 2A 
 ppo-u.5   18094204   tobamovirus multiplication protein 2A 
 ppo-u.5   18096933   tobamovirus multiplication protein 2A 
 mtr-u.5   11438463   tobamovirus multiplication protein 2A 
 mtr-u.5   25493549   tobamovirus multiplication protein 2A 
 sly-u.5   101262238   tobamovirus multiplication protein 2A 
 sot-r.1   102598662   tobamovirus multiplication protein 2A 
 nta-r.1   107813318   tobamovirus multiplication protein 2A-like 
 nta-r.1   107823134   tobamovirus multiplication protein 2A 
 osa-u.5   4345165   tobamovirus multiplication protein 2A 
 zma-u.5   100280216   Tobamovirus multiplication protein 2A 
 zma-u.5   100284460   tetraspanin family protein 
 tae-r.2   123043793   tobamovirus multiplication protein 2A 
 tae-r.2   123180855   tobamovirus multiplication protein 2A 
 tae-r.2   123117022   tobamovirus multiplication protein 2A 
 hvu-r.1   123429009   tobamovirus multiplication protein 2A 
 sbi-r.1   110431668   tobamovirus multiplication protein 2A 
 bdi-r.1   100824715   tobamovirus multiplication protein 2A 

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Top 50 coexpressed genes to TOM2A (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TOM2A (ath-u.5 coexpression data)

CoexMap"840133"


athTOM2A | Entrez gene ID : 840133      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 3 1 2 2 1 1 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009705 [list] [network] plant-type vacuole membrane  (117 genes)  IDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0016020 [list] [network] membrane  (3740 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031127.1 [sequence] [blastp]
NP_564399.1 [sequence] [blastp]
NP_973952.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  vacu 3,  cyto 1,  extr 1,  E.R. 1,  golg 1,  cyto_E.R. 1  (predict for NP_001031127.1)
plas 4,  vacu 3,  cyto 1,  extr 1,  E.R. 1,  golg 1,  cyto_E.R. 1  (predict for NP_564399.1)
plas 4,  vacu 3,  cyto 1,  extr 1,  E.R. 1,  golg 1,  cyto_E.R. 1  (predict for NP_973952.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001031127.1)
scret 9  (predict for NP_564399.1)
scret 9  (predict for NP_973952.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
TOM2A
ath-r.7
for
TOM2A
ath-m.9
for
TOM2A
ath-e.2
for
TOM2A
ath-m.4.bio
for
TOM2A
ath-m.4.hor
for
TOM2A
ath-m.4.lig
for
TOM2A
ath-m.4.str
for
TOM2A
ath-m.4.tis
for
TOM2A
bra-r.6
for
103840163
bra-r.6
for
103874745
bna-r.1
for
125608739
bna-r.1
for
106361645
bna-r.1
for
106367133
ghi-r.1
for
121211111
ghi-r.1
for
107946724
ghi-r.1
for
107933567
cit-r.1
for
102607083
gma-u.5
for
547883
gma-u.5
for
100815033
gma-u.5
for
100793680
vvi-u.5
for
100245417
ppo-u.5
for
18094204
ppo-u.5
for
18096933
mtr-u.5
for
11438463
mtr-u.5
for
25493549
sly-u.5
for
101262238
sot-r.1
for
102598662
nta-r.1
for
107813318
nta-r.1
for
107823134
osa-u.5
for
4345165
zma-u.5
for
100280216
zma-u.5
for
100284460
tae-r.2
for
123043793
tae-r.2
for
123180855
tae-r.2
for
123117022
hvu-r.1
for
123429009
sbi-r.1
for
110431668
bdi-r.1
for
100824715


Ortholog ID: 5628
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol TOM2A LOC103840163 LOC103874745 LOC125608739 LOC106361645 LOC106380611 LOC107933567 LOC107896541 LOC107890623 LOC102607083 LOC547883 LOC100793680 LOC100791911 LOC100245417 LOC18094204 LOC18096933 LOC11438463 LOC25493549 LOC101262238 LOC102598662 LOC107813318 LOC107823134 LOC4345165 LOC100280216 LOC100284460 LOC123043793 LOC123180855 LOC123117022 LOC123429009 LOC110431668 LOC100824715
Function* tobamovirus multiplication 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A-like tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A-like tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tetraspanin domain-containing protein tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A-like tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A Tobamovirus multiplication protein 2A tetraspanin family protein tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A tobamovirus multiplication protein 2A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
ath04142 Lysosome 3
ath04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi04142 Lysosome 6
ghi04145 Phagosome 6
ghi04144 Endocytosis 2
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
ghi04142 Lysosome 5
ghi04145 Phagosome 5
ghi04144 Endocytosis 2
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit04145 Phagosome 2
cit04148 Efferocytosis 2
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00190 Oxidative phosphorylation 2
ppo03060 Protein export 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 5
mtr03272 Virion - Hepatitis viruses 3
mtr04130 SNARE interactions in vesicular transport 2
mtr03250 Viral life cycle - HIV-1 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 10
osa04145 Phagosome 10
osa04142 Lysosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
tae04145 Phagosome 2
tae04148 Efferocytosis 2
tae04517 IgSF CAM signaling 2
tae04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu04144 Endocytosis 3
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi03083 Polycomb repressive complex 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840133 103840163 103874745 125608739 106361645 106380611 107933567 107896541 107890623 102607083 547883 100793680 100791911 100245417 18094204 18096933 11438463 25493549 101262238 102598662 107813318 107823134 4345165 100280216 100284460 123043793 123180855 123117022 123429009 110431668 100824715
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