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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RHL1   root hair initiation protein root hairless 1 (RHL1) 
 ath-r.7   RHL1   root hair initiation protein root hairless 1 (RHL1) 
 ath-m.9   RHL1   root hair initiation protein root hairless 1 (RHL1) 
 ath-e.2   RHL1   root hair initiation protein root hairless 1 (RHL1) 
 ath-m.4.bio   RHL1   root hair initiation protein root hairless 1 (RHL1) 
 ath-m.4.hor   RHL1   root hair initiation protein root hairless 1 (RHL1) 
 ath-m.4.lig   RHL1   root hair initiation protein root hairless 1 (RHL1) 
 ath-m.4.str   RHL1   root hair initiation protein root hairless 1 (RHL1) 
 ath-m.4.tis   RHL1   root hair initiation protein root hairless 1 (RHL1) 
 bra-r.6   103833010   DNA-binding protein RHL1 
 bna-r.1   106360541   DNA-binding protein RHL1-like 
 bna-r.1   111197735   DNA-binding protein RHL1-like 
 ghi-r.1   107928346   DNA-binding protein RHL1 
 ghi-r.1   107909093   DNA-binding protein RHL1 
 cit-r.1   102611651   DNA-binding protein RHL1 
 gma-u.5   100817620   DNA-binding protein RHL1 
 gma-u.5   100800543   DNA-binding protein RHL1 
 vvi-u.5   100256840   DNA-binding protein RHL1 
 ppo-u.5   7494362   DNA-binding protein RHL1 
 mtr-u.5   11422248   DNA-binding protein RHL1 
 sly-u.5   101260519   DNA-binding protein RHL1 
 sot-r.1   102598969   DNA-binding protein RHL1 
 nta-r.1   107821159   DNA-binding protein RHL1 
 nta-r.1   107798097   DNA-binding protein RHL1 
 osa-u.5   4342516   DNA-binding protein RHL1 
 osa-u.5   9272197   uncharacterized LOC9272197 
 zma-u.5   100280291   uncharacterized LOC100280291 
 tae-r.2   123156938   DNA-binding protein RHL1 
 tae-r.2   123149883   DNA-binding protein RHL1 
 tae-r.2   123165756   DNA-binding protein RHL1 
 hvu-r.1   123407425   DNA-binding protein RHL1 
 sbi-r.1   8066392   DNA-binding protein RHL1 
 bdi-r.1   100842808   DNA-binding protein RHL1 
 cre-r.1   CHLRE_13g576500v5   uncharacterized protein 

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Top 50 coexpressed genes to RHL1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RHL1 (ath-u.5 coexpression data)

CoexMap"841258"


athRHL1 | Entrez gene ID : 841258      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 2 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048766 [list] [network] root hair initiation  (20 genes)  IMP  
GO:0042023 [list] [network] DNA endoreduplication  (21 genes)  IMP  
GO CC
GO:0005730 [list] [network] nucleolus  (394 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1274 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001117449.1 [sequence] [blastp]
NP_564526.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001117449.1)
nucl 9  (predict for NP_564526.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001117449.1)
other 7,  chlo 3  (predict for NP_564526.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RHL1
ath-r.7
for
RHL1
ath-m.9
for
RHL1
ath-e.2
for
RHL1
ath-m.4.bio
for
RHL1
ath-m.4.hor
for
RHL1
ath-m.4.lig
for
RHL1
ath-m.4.str
for
RHL1
ath-m.4.tis
for
RHL1
bra-r.6
for
103833010
bna-r.1
for
106360541
bna-r.1
for
111197735
ghi-r.1
for
107928346
ghi-r.1
for
107909093
cit-r.1
for
102611651
gma-u.5
for
100817620
gma-u.5
for
100800543
vvi-u.5
for
100256840
ppo-u.5
for
7494362
mtr-u.5
for
11422248
sly-u.5
for
101260519
sot-r.1
for
102598969
nta-r.1
for
107821159
nta-r.1
for
107798097
osa-u.5
for
4342516
osa-u.5
for
9272197
zma-u.5
for
100280291
tae-r.2
for
123156938
tae-r.2
for
123149883
tae-r.2
for
123165756
hvu-r.1
for
123407425
sbi-r.1
for
8066392
bdi-r.1
for
100842808
cre-r.1
for
CHLRE_13g576500v5


Ortholog ID: 9830
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma tae tae tae hvu sbi bdi cre
Symbol RHL1 LOC103833010 LOC106360541 LOC111197735 LOC107928346 LOC107909093 LOC102611651 LOC100817620 LOC100800543 LOC100256840 LOC7494362 LOC11422248 LOC101260519 LOC102598969 LOC107821159 LOC107798097 LOC4342516 LOC9272197 LOC100280291 LOC123156938 LOC123149883 LOC123165756 LOC123407425 LOC8066392 LOC100842808 CHLRE_13g576500v5
Function* root hair initiation protein root hairless 1 (RHL1) DNA-binding protein RHL1 DNA-binding protein RHL1-like DNA-binding protein RHL1-like DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 uncharacterized LOC9272197 uncharacterized LOC100280291 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 DNA-binding protein RHL1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 8
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 3
ppo03440 Homologous recombination 3
ppo03460 Fanconi anemia pathway 3
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 3
nta03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 3
nta01200 Carbon metabolism 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00380 Tryptophan metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
tae04016 MAPK signaling pathway - plant 2
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841258 103833010 106360541 111197735 107928346 107909093 102611651 100817620 100800543 100256840 7494362 11422248 101260519 102598969 107821159 107798097 4342516 9272197 100280291 123156938 123149883 123165756 123407425 8066392 100842808 5719244
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