ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT1G52565	cytochrome P450 family protein
ath-r.7	AT1G52565	cytochrome P450 family protein
ath-e.2	AT1G52565	cytochrome P450 family protein
ath-u.5	AT3G15760	cytochrome P450 family protein
bra-r.6	103869875	uncharacterized LOC103869875
bra-r.6	103871207	uncharacterized LOC103871207
bna-r.1	BNAA06G01910D	uncharacterized BNAA06G01910D
bna-r.1	125597259	uncharacterized LOC125597259
bna-r.1	106449388	uncharacterized LOC106449388
ghi-r.1	107897265	uncharacterized LOC107897265
ghi-r.1	107914566	uncharacterized LOC107914566
cit-r.1	102626047	uncharacterized LOC102626047
cit-r.1	102630536	hypothetical protein
gma-u.5	100306632	uncharacterized LOC100306632
gma-u.5	100786698	transcription initiation factor TFIID subunit 11
vvi-u.5	100261053	uncharacterized LOC100261053
vvi-u.5	100255957	uncharacterized LOC100255957
ppo-u.5	7485475	uncharacterized LOC7485475
ppo-u.5	7470099	uncharacterized LOC7470099
ppo-u.5	7475118	uncharacterized LOC7475118
mtr-u.5	11417865	uncharacterized LOC11417865
mtr-u.5	11432517	uncharacterized LOC11432517
mtr-u.5	11441653	uncharacterized LOC11441653
sly-u.5	101253674	uncharacterized LOC101253674
sly-u.5	101249561	uncharacterized LOC101249561
sot-r.1	102598465	uncharacterized LOC102598465
sot-r.1	102595919	uncharacterized LOC102595919
nta-r.1	107777048	uncharacterized LOC107777048
nta-r.1	107823176	uncharacterized LOC107823176
nta-r.1	107819186	uncharacterized LOC107819186
osa-u.5	4328649	uncharacterized LOC4328649
osa-u.5	4341471	uncharacterized LOC4341471
zma-u.5	100277580	uncharacterized LOC100277580
zma-u.5	100275516	uncharacterized LOC100275516
zma-u.5	103638686	uncharacterized LOC103638686
tae-r.2	123152002	uncharacterized LOC123152002
tae-r.2	123134092	uncharacterized LOC123134092
tae-r.2	123130565	uncharacterized LOC123130565
hvu-r.1	123402657	uncharacterized LOC123402657
hvu-r.1	123412363	uncharacterized LOC123412363
sbi-r.1	8082263	uncharacterized LOC8082263
sbi-r.1	8082920	uncharacterized LOC8082920
bdi-r.1	100835368	hypothetical protein-1
bdi-r.1	100829911	uncharacterized LOC100829911

Top 50 coexpressed genes to AT1G52565 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT1G52565 (ath-u.5 coexpression data)

CoexMap"841688"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

ISM

GO MF

Protein

NP_683424.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 3, extr 1, nucl 1, E.R. 1, golg 1

(predict for NP_683424.2)

Subcellular
localization
TargetP

scret 9

(predict for NP_683424.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT1G52565	ath-r.7 for AT1G52565	ath-e.2 for AT1G52565	ath-u.5 for AT3G15760	bra-r.6 for 103869875	bra-r.6 for 103871207	bna-r.1 for BNAA06G01910D	bna-r.1 for 125597259	bna-r.1 for 106449388	ghi-r.1 for 107897265	ghi-r.1 for 107914566	cit-r.1 for 102626047	cit-r.1 for 102630536	gma-u.5 for 100306632	gma-u.5 for 100786698	vvi-u.5 for 100261053	vvi-u.5 for 100255957	ppo-u.5 for 7485475	ppo-u.5 for 7470099	ppo-u.5 for 7475118	mtr-u.5 for 11417865	mtr-u.5 for 11432517	mtr-u.5 for 11441653	sly-u.5 for 101253674	sly-u.5 for 101249561	sot-r.1 for 102598465	sot-r.1 for 102595919	nta-r.1 for 107777048	nta-r.1 for 107823176	nta-r.1 for 107819186	osa-u.5 for 4328649	osa-u.5 for 4341471	zma-u.5 for 100277580	zma-u.5 for 100275516	zma-u.5 for 103638686	tae-r.2 for 123152002	tae-r.2 for 123134092	tae-r.2 for 123130565	hvu-r.1 for 123402657	hvu-r.1 for 123412363	sbi-r.1 for 8082263	sbi-r.1 for 8082920	bdi-r.1 for 100835368	bdi-r.1 for 100829911

Ortholog

Ortholog ID: 1922

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

cytochrome P450 family protein

uncharacterized LOC103869875

uncharacterized BNAA06G01910D

uncharacterized LOC125609496

uncharacterized LOC106399522

uncharacterized LOC121229348

uncharacterized LOC107907334

uncharacterized LOC107903239

uncharacterized LOC102626047

hypothetical protein

transcription initiation factor TFIID subunit 11

uncharacterized LOC100784964

uncharacterized LOC100261053

uncharacterized LOC100255957

uncharacterized LOC7485475

uncharacterized LOC7470099

uncharacterized LOC7475118

uncharacterized LOC11417865

uncharacterized LOC11432517

uncharacterized LOC11441653

uncharacterized LOC101253674

uncharacterized LOC101249561

uncharacterized LOC102598465

uncharacterized LOC102595919

uncharacterized LOC107777048

uncharacterized LOC107823176

uncharacterized LOC107819186

uncharacterized LOC4328649

uncharacterized LOC4341471

uncharacterized LOC100277580

uncharacterized LOC100275516

uncharacterized LOC103638686

uncharacterized LOC123152002

uncharacterized LOC123141403

uncharacterized LOC123165552

uncharacterized LOC123402657

uncharacterized LOC123412363

uncharacterized LOC8082263

uncharacterized LOC8082920

hypothetical protein-1

uncharacterized LOC100829911

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	8
ath04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04075	Plant hormone signal transduction	4
ghi04626	Plant-pathogen interaction	3
ghi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	2
gma00543	Exopolysaccharide biosynthesis	2
gma00920	Sulfur metabolism	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	4
mtr04016	MAPK signaling pathway - plant	3
mtr04070	Phosphatidylinositol signaling system	3
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00905	Brassinosteroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2
nta00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	5
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	6
tae03040	Spliceosome	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

841688

820819

103869875

106447403

125609496

106399522

121229348

107907334

107903239

102626047

102630536

100786698

100784964

100261053

100255957

7485475

7470099

7475118

11417865

11432517

11441653

101253674

101249561

102598465

102595919

107777048

107823176

107819186

4328649

4341471

100277580

100275516

103638686

123152002

123141403

123165552

123402657

123412363

8082263

8082920

100835368

100829911

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	2	2	2	2	3	3	2	2	3	2	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT1G52565 (ath-u.5 coexpression data)

Top 50 enrichment test to AT1G52565 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**