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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G53330   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT1G53330   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT1G53330   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103832674   putative pentatricopeptide repeat-containing protein At1g53330 
 ghi-r.1   107893715   putative pentatricopeptide repeat-containing protein At1g53330 
 cit-r.1   102614731   putative pentatricopeptide repeat-containing protein At1g53330 
 cit-r.1   127901373   putative pentatricopeptide repeat-containing protein At1g53330 
 gma-u.5   100781017   putative pentatricopeptide repeat-containing protein At1g53330 
 mtr-u.5   25501261   putative pentatricopeptide repeat-containing protein At1g53330 
 sly-u.5   101264899   putative pentatricopeptide repeat-containing protein At1g53330 
 sot-r.1   102600969   putative pentatricopeptide repeat-containing protein At1g53330 
 zma-u.5   100285499   rf1 protein 
 hvu-r.1   123403924   putative pentatricopeptide repeat-containing protein At1g53330 
 sbi-r.1   8065930   putative pentatricopeptide repeat-containing protein At1g53330 

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Top 50 coexpressed genes to AT1G53330 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G53330 (ath-u.5 coexpression data)

CoexMap"841768"


athAT1G53330 | Entrez gene ID : 841768      
Species ath bra ghi cit gma mtr sly sot zma hvu sbi cre vvi ppo nta bna tae bdi osa
Paralog 3 1 1 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO:0048367 [list] [network] shoot system development  (800 genes)  IMP  
GO:0010154 [list] [network] fruit development  (807 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001321837.1 [sequence] [blastp]
NP_175740.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for NP_001321837.1)
chlo 5,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for NP_175740.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001321837.1)
mito 5,  chlo 4  (predict for NP_175740.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G53330
ath-r.7
for
AT1G53330
ath-e.2
for
AT1G53330
bra-r.6
for
103832674
ghi-r.1
for
107893715
cit-r.1
for
102614731
cit-r.1
for
127901373
gma-u.5
for
100781017
mtr-u.5
for
25501261
sly-u.5
for
101264899
sot-r.1
for
102600969
zma-u.5
for
100285499
hvu-r.1
for
123403924
sbi-r.1
for
8065930


Ortholog ID: 11088
Species ath bra ghi cit cit gma mtr sly sot zma hvu sbi
Symbol AT1G53330 LOC103832674 LOC107893715 LOC102614731 LOC127901373 LOC100781017 LOC25501261 LOC101264899 LOC102600969 LOC100285499 LOC123403924 LOC8065930
Function* Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At1g53330 putative pentatricopeptide repeat-containing protein At1g53330 putative pentatricopeptide repeat-containing protein At1g53330 putative pentatricopeptide repeat-containing protein At1g53330 putative pentatricopeptide repeat-containing protein At1g53330 putative pentatricopeptide repeat-containing protein At1g53330 putative pentatricopeptide repeat-containing protein At1g53330 putative pentatricopeptide repeat-containing protein At1g53330 rf1 protein putative pentatricopeptide repeat-containing protein At1g53330 putative pentatricopeptide repeat-containing protein At1g53330
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841768 103832674 107893715 102614731 127901373 100781017 25501261 101264899 102600969 100285499 123403924 8065930
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