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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G55980   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-r.7   AT1G55980   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-e.2   AT1G55980   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-u.5   AT1G56000   FAD/NAD(P)-binding oxidoreductase family protein 
 bra-r.6   103868373   renalase 
 bna-r.1   BNAA05G13480D   renalase 
 bna-r.1   BNAC06G11190D   renalase 
 bna-r.1   125601986   renalase-like 
 ghi-r.1   107919092   renalase 
 ghi-r.1   107912941   renalase 
 cit-r.1   102628137   uncharacterized LOC102628137 
 gma-u.5   100816696   renalase 
 vvi-u.5   100264528   uncharacterized LOC100264528 
 ppo-u.5   18095760   uncharacterized LOC18095760 
 mtr-u.5   11438247   renalase 
 sly-u.5   101259984   uncharacterized LOC101259984 
 sot-r.1   102586397   uncharacterized LOC102586397 
 nta-r.1   107822118   uncharacterized LOC107822118 
 osa-u.5   4334332   uncharacterized LOC4334332 
 zma-u.5   100283467   deoxyribodipyrimidine photolyase 
 tae-r.2   123113563   renalase 
 tae-r.2   123123092   renalase 
 tae-r.2   123107942   renalase 
 hvu-r.1   123452553   renalase 
 sbi-r.1   8083928   renalase 
 bdi-r.1   100828433   renalase 

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Top 50 coexpressed genes to AT1G55980 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G55980 (ath-u.5 coexpression data)

CoexMap"842049"


athAT1G55980 | Entrez gene ID : 842049      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 3 2 1 1 1 1 1 1 1 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001319248.1 [sequence] [blastp]
NP_001321918.1 [sequence] [blastp]
NP_175994.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001319248.1)
nucl 6,  chlo 3,  nucl_plas 3  (predict for NP_001321918.1)
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for NP_175994.3)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for NP_001319248.1)
other 8  (predict for NP_001321918.1)
chlo 4  (predict for NP_175994.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G55980
ath-r.7
for
AT1G55980
ath-e.2
for
AT1G55980
ath-u.5
for
AT1G56000
bra-r.6
for
103868373
bna-r.1
for
BNAA05G13480D
bna-r.1
for
BNAC06G11190D
bna-r.1
for
125601986
ghi-r.1
for
107919092
ghi-r.1
for
107912941
cit-r.1
for
102628137
gma-u.5
for
100816696
vvi-u.5
for
100264528
ppo-u.5
for
18095760
mtr-u.5
for
11438247
sly-u.5
for
101259984
sot-r.1
for
102586397
nta-r.1
for
107822118
osa-u.5
for
4334332
zma-u.5
for
100283467
tae-r.2
for
123113563
tae-r.2
for
123123092
tae-r.2
for
123107942
hvu-r.1
for
123452553
sbi-r.1
for
8083928
bdi-r.1
for
100828433


Ortholog ID: 11093
Species ath ath bra bna bna bna ghi ghi cit gma vvi ppo mtr sly sot nta osa zma tae tae tae hvu sbi bdi
Symbol AT1G55980 AT1G56000 LOC103868373 BNAA05G13480D BNAC06G11190D LOC125601986 LOC107919092 LOC107912941 LOC102628137 LOC100816696 LOC100264528 LOC18095760 LOC11438247 LOC101259984 LOC102586397 LOC107822118 LOC4334332 LOC100283467 LOC123113563 LOC123123092 LOC123107942 LOC123452553 LOC8083928 LOC100828433
Function* FAD/NAD(P)-binding oxidoreductase family protein FAD/NAD(P)-binding oxidoreductase family protein renalase renalase renalase renalase-like renalase renalase uncharacterized LOC102628137 renalase uncharacterized LOC100264528 uncharacterized LOC18095760 renalase uncharacterized LOC101259984 uncharacterized LOC102586397 uncharacterized LOC107822118 uncharacterized LOC4334332 deoxyribodipyrimidine photolyase renalase renalase renalase renalase renalase renalase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00480 Glutathione metabolism 2
ppo00350 Tyrosine metabolism 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00053 Ascorbate and aldarate metabolism 3
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00760 Nicotinate and nicotinamide metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 6
zma01230 Biosynthesis of amino acids 6
zma00710 Carbon fixation by Calvin cycle 5
zma00010 Glycolysis / Gluconeogenesis 3
zma00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842049 842051 103868373 106412247 106406798 125601986 107919092 107912941 102628137 100816696 100264528 18095760 11438247 101259984 102586397 107822118 4334332 100283467 123113563 123123092 123107942 123452553 8083928 100828433
The preparation time of this page was 2.6 [sec].