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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G70200   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-r.7   AT1G70200   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.9   AT1G70200   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-e.2   AT1G70200   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.bio   AT1G70200   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.hor   AT1G70200   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.lig   AT1G70200   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.str   AT1G70200   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.tis   AT1G70200   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103830892   protein DEK 
 bna-r.1   106353944   protein DEK 
 bna-r.1   106446506   uncharacterized LOC106446506 
 ghi-r.1   107910381   uncharacterized LOC107910381 
 ghi-r.1   107916891   uncharacterized LOC107916891 
 cit-r.1   102621882   uncharacterized LOC102621882 
 gma-u.5   100786279   uncharacterized LOC100786279 
 gma-u.5   100776108   ubiquitin carboxyl-terminal hydrolase 36 
 vvi-u.5   100250082   uncharacterized LOC100250082 
 ppo-u.5   7457853   uncharacterized LOC7457853 
 mtr-u.5   11412841   uncharacterized LOC11412841 
 sly-u.5   101263704   uncharacterized LOC101263704 
 sot-r.1   102605327   uncharacterized LOC102605327 
 nta-r.1   107793199   uncharacterized LOC107793199 
 nta-r.1   107760275   uncharacterized LOC107760275 
 osa-u.5   4329188   uncharacterized LOC4329188 
 zma-u.5   100276961   uncharacterized LOC100276961 
 tae-r.2   123156715   uncharacterized LOC123156715 
 tae-r.2   123150505   uncharacterized LOC123150505 
 hvu-r.1   123413491   uncharacterized LOC123413491 
 sbi-r.1   8077632   uncharacterized LOC8077632 
 bdi-r.1   100823996   uncharacterized LOC100823996 

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Top 50 coexpressed genes to AT1G70200 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G70200 (ath-u.5 coexpression data)

CoexMap"843356"


athAT1G70200 | Entrez gene ID : 843356      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032544 [list] [network] plastid translation  (20 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (183 genes)  IMP  
GO:0009409 [list] [network] response to cold  (436 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  IMP  
GO MF
GO:0019843 [list] [network] rRNA binding  (19 genes)  IDA  
Protein NP_177177.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for NP_177177.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_177177.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G70200
ath-r.7
for
AT1G70200
ath-m.9
for
AT1G70200
ath-e.2
for
AT1G70200
ath-m.4.bio
for
AT1G70200
ath-m.4.hor
for
AT1G70200
ath-m.4.lig
for
AT1G70200
ath-m.4.str
for
AT1G70200
ath-m.4.tis
for
AT1G70200
bra-r.6
for
103830892
bna-r.1
for
106353944
bna-r.1
for
106446506
ghi-r.1
for
107910381
ghi-r.1
for
107916891
cit-r.1
for
102621882
gma-u.5
for
100786279
gma-u.5
for
100776108
vvi-u.5
for
100250082
ppo-u.5
for
7457853
mtr-u.5
for
11412841
sly-u.5
for
101263704
sot-r.1
for
102605327
nta-r.1
for
107793199
nta-r.1
for
107760275
osa-u.5
for
4329188
zma-u.5
for
100276961
tae-r.2
for
123156715
tae-r.2
for
123150505
hvu-r.1
for
123413491
sbi-r.1
for
8077632
bdi-r.1
for
100823996


Ortholog ID: 11517
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol AT1G70200 LOC103830892 LOC106353944 LOC106446506 LOC107910381 LOC107916891 LOC102621882 LOC100786279 LOC100776108 LOC100250082 LOC7457853 LOC11412841 LOC101263704 LOC102605327 LOC107793199 LOC107760275 LOC4329188 LOC100276961 LOC123156715 LOC123150505 LOC123413491 LOC8077632 LOC100823996
Function* RNA-binding (RRM/RBD/RNP motifs) family protein protein DEK protein DEK uncharacterized LOC106446506 uncharacterized LOC107910381 uncharacterized LOC107916891 uncharacterized LOC102621882 uncharacterized LOC100786279 ubiquitin carboxyl-terminal hydrolase 36 uncharacterized LOC100250082 uncharacterized LOC7457853 uncharacterized LOC11412841 uncharacterized LOC101263704 uncharacterized LOC102605327 uncharacterized LOC107793199 uncharacterized LOC107760275 uncharacterized LOC4329188 uncharacterized LOC100276961 uncharacterized LOC123156715 uncharacterized LOC123150505 uncharacterized LOC123413491 uncharacterized LOC8077632 uncharacterized LOC100823996
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843356 103830892 106353944 106446506 107910381 107916891 102621882 100786279 100776108 100250082 7457853 11412841 101263704 102605327 107793199 107760275 4329188 100276961 123156715 123150505 123413491 8077632 100823996
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