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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   EMB1135   RING/FYVE/PHD zinc finger superfamily protein 
 ath-r.7   EMB1135   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.9   EMB1135   RING/FYVE/PHD zinc finger superfamily protein 
 ath-e.2   EMB1135   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.bio   EMB1135   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.hor   EMB1135   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.lig   EMB1135   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.str   EMB1135   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.tis   EMB1135   RING/FYVE/PHD zinc finger superfamily protein 
 gma-u.5   100808670   protein FORGETTER 1 
 gma-u.5   100804594   protein FORGETTER 1 
 vvi-u.5   100267281   protein FORGETTER 1 
 ppo-u.5   7464569   protein FORGETTER 1 
 ppo-u.5   7462139   protein FORGETTER 1 
 mtr-u.5   11442162   protein FORGETTER 1 
 mtr-u.5   25502443   protein FORGETTER 1 
 mtr-u.5   11445788   protein FORGETTER 1 
 sly-u.5   101248817   protein FORGETTER 1 
 osa-u.5   4336941   protein FORGETTER 1-like 
 osa-u.5   4344965   protein FORGETTER 1 
 zma-u.5   103642489   protein FORGETTER 1 
 zma-u.5   100502351   protein FORGETTER 1 

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Top 50 coexpressed genes to EMB1135 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to EMB1135 (ath-u.5 coexpression data)

CoexMap"844273"


athEMB1135 | Entrez gene ID : 844273      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 2 1 2 3 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1900036 [list] [network] positive regulation of cellular response to heat  (6 genes)  IMP  
GO:0010286 [list] [network] heat acclimation  (64 genes)  IMP  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (174 genes)  IMP  
GO:0009408 [list] [network] response to heat  (271 genes)  IDA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  NAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:1990841 [list] [network] promoter-specific chromatin binding  (15 genes)  IDA  
GO:0031490 [list] [network] chromatin DNA binding  (22 genes)  IDA  
GO:0042393 [list] [network] histone binding  (50 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_178053.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for NP_178053.4)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for NP_178053.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
EMB1135

.
ath-r.7
for
EMB1135

.
ath-m.9
for
EMB1135

.
ath-e.2
for
EMB1135

.
ath-m.4.bio
for
EMB1135

.
ath-m.4.hor
for
EMB1135

.
ath-m.4.lig
for
EMB1135

.
ath-m.4.str
for
EMB1135

.
ath-m.4.tis
for
EMB1135

.
gma-u.5
for
100808670

.
gma-u.5
for
100804594

.
vvi-u.5
for
100267281

.
ppo-u.5
for
7464569

.
ppo-u.5
for
7462139

.
mtr-u.5
for
11442162

.
mtr-u.5
for
25502443

.
mtr-u.5
for
11445788

.
sly-u.5
for
101248817

.
osa-u.5
for
4336941

.
osa-u.5
for
4344965

.
zma-u.5
for
103642489

.
zma-u.5
for
100502351

.


Ortholog ID: 6442
Species ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol EMB1135 LOC100808670 LOC100804594 LOC101248817 LOC4336941 LOC4344965 LOC100502351 LOC103642489 LOC103832410 LOC100267281 LOC7464569 LOC7462139 LOC11445788 LOC25502443 LOC123148556 LOC123054352 LOC123427655 LOC123407079 LOC107893540 LOC107919805 LOC111206977 LOC106354777 CHLRE_13g578501v5 LOC8072319 LOC8072159 LOC102590438 LOC102622040 LOC100829866 LOC100830948 LOC107779691 LOC107815374
Function* RING/FYVE/PHD zinc finger superfamily protein protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1-like protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1-like protein FORGETTER 1-like protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1 uncharacterized protein protein FORGETTER 1 protein FORGETTER 1 protein strawberry notch protein FORGETTER 1 protein FORGETTER 1-like protein FORGETTER 1 protein FORGETTER 1 protein FORGETTER 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
ath04136 Autophagy - other 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 4
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03440 Homologous recombination 2
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae00310 Lysine degradation 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna04120 Ubiquitin mediated proteolysis 4
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi04136 Autophagy - other 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844273 100808670 100804594 101248817 4336941 4344965 100502351 103642489 103832410 100267281 7464569 7462139 11445788 25502443 123148556 123054352 123427655 123407079 107893540 107919805 111206977 106354777 5719278 8072319 8072159 102590438 102622040 100829866 100830948 107779691 107815374
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