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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   DTA4   downstream target of AGL15-4 
 ath-r.7   DTA4   downstream target of AGL15-4 
 ath-m.9   DTA4   downstream target of AGL15-4 
 ath-e.2   DTA4   downstream target of AGL15-4 
 ath-m.4.bio   DTA4   downstream target of AGL15-4 
 ath-m.4.hor   DTA4   downstream target of AGL15-4 
 ath-m.4.lig   DTA4   downstream target of AGL15-4 
 ath-m.4.str   DTA4   downstream target of AGL15-4 
 ath-m.4.tis   DTA4   downstream target of AGL15-4 
 bra-r.6   103830394   uncharacterized LOC103830394 
 bna-r.1   106353339   uncharacterized LOC106353339 
 bna-r.1   BNAC06G18880D   uncharacterized BNAC06G18880D 
 ghi-r.1   107950627   1-aminocyclopropane-1-carboxylate oxidase 5 
 ghi-r.1   107951919   1-aminocyclopropane-1-carboxylate oxidase 5 
 ghi-r.1   107914551   flavanone 3-dioxygenase 2 
 gma-u.5   100799796   flavonol synthase/flavanone 3-hydroxylase 
 gma-u.5   100786234   1-aminocyclopropane-1-carboxylate oxidase 
 ppo-u.5   7475099   flavonol synthase/flavanone 3-hydroxylase 
 mtr-u.5   11435010   flavanone 3-dioxygenase 2 
 sly-u.5   101256366   flavonol synthase/flavanone 3-hydroxylase 
 sot-r.1   102579177   flavonol synthase/flavanone 3-hydroxylase 
 nta-r.1   107811887   flavanone 3-dioxygenase 2 
 nta-r.1   107796648   gibberellin 3-beta-dioxygenase 4-like 
 osa-u.5   4326169   uncharacterized LOC4326169 
 zma-u.5   103651217   downstream target of AGL15-4 

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Top 50 coexpressed genes to DTA4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DTA4 (ath-u.5 coexpression data)

CoexMap"844315"


athDTA4 | Entrez gene ID : 844315      
Species ath bra bna ghi gma ppo mtr sly sot nta osa zma cre vvi hvu tae bdi cit sbi
Paralog 9 1 2 3 2 1 1 1 1 2 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001321122.1 [sequence] [blastp]
NP_178094.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 2,  chlo_mito 2,  vacu 1,  nucl_plas 1,  golg_plas 1,  E.R._plas 1  (predict for NP_001321122.1)
chlo 3,  plas 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_178094.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001321122.1)
chlo 6  (predict for NP_178094.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
DTA4
ath-r.7
for
DTA4
ath-m.9
for
DTA4
ath-e.2
for
DTA4
ath-m.4.bio
for
DTA4
ath-m.4.hor
for
DTA4
ath-m.4.lig
for
DTA4
ath-m.4.str
for
DTA4
ath-m.4.tis
for
DTA4
bra-r.6
for
103830394
bna-r.1
for
106353339
bna-r.1
for
BNAC06G18880D
ghi-r.1
for
107950627
ghi-r.1
for
107951919
ghi-r.1
for
107914551
gma-u.5
for
100799796
gma-u.5
for
100786234
ppo-u.5
for
7475099
mtr-u.5
for
11435010
sly-u.5
for
101256366
sot-r.1
for
102579177
nta-r.1
for
107811887
nta-r.1
for
107796648
osa-u.5
for
4326169
zma-u.5
for
103651217


Ortholog ID: 9303
Species ath bra bna bna ghi ghi ghi gma gma ppo mtr sly sot nta nta osa zma
Symbol DTA4 LOC103830394 LOC106353339 BNAC06G18880D LOC107950627 LOC107951919 LOC107897347 LOC100799796 LOC100786234 LOC7475099 LOC11435010 LOC101256366 LOC102579177 LOC107811887 LOC107796648 LOC4326169 LOC103651217
Function* downstream target of AGL15-4 uncharacterized LOC103830394 uncharacterized LOC106353339 uncharacterized BNAC06G18880D 1-aminocyclopropane-1-carboxylate oxidase 5 1-aminocyclopropane-1-carboxylate oxidase 5 flavanone 3-dioxygenase 2 flavonol synthase/flavanone 3-hydroxylase 1-aminocyclopropane-1-carboxylate oxidase flavonol synthase/flavanone 3-hydroxylase flavanone 3-dioxygenase 2 flavonol synthase/flavanone 3-hydroxylase flavonol synthase/flavanone 3-hydroxylase flavanone 3-dioxygenase 2 gibberellin 3-beta-dioxygenase 4-like uncharacterized LOC4326169 downstream target of AGL15-4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844315 103830394 106353339 106385046 107950627 107951919 107897347 100799796 100786234 7475099 11435010 101256366 102579177 107811887 107796648 4326169 103651217
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