ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103828935	probable galacturonosyltransferase-like 6
bra-r.6	103829229	probable galacturonosyltransferase-like 8
bra-r.6	103830363	probable galacturonosyltransferase-like 7
bra-r.6	103831556	probable galacturonosyltransferase-like 9
bna-r.1	111212730	probable galacturonosyltransferase-like 6
bna-r.1	125576505	probable galacturonosyltransferase-like 8
ath-u.5	GATL10	galacturonosyltransferase-like 10
ath-u.5	GATL7	galacturonosyltransferase-like 7
ath-u.5	GATL6	galacturonosyltransferase 6
ghi-r.1	107886320	probable galacturonosyltransferase-like 9
ghi-r.1	107886627	probable galacturonosyltransferase-like 9
ghi-r.1	107903691	probable galacturonosyltransferase-like 9
cit-r.1	102612425	probable galacturonosyltransferase-like 10
cit-r.1	102613476	probable galacturonosyltransferase-like 9
cit-r.1	102622159	probable galacturonosyltransferase-like 7
gma-u.5	100780084	probable galacturonosyltransferase-like 10
gma-u.5	100813364	probable galacturonosyltransferase-like 9
gma-u.5	100812586	probable galacturonosyltransferase-like 10
vvi-u.5	100265777	probable galacturonosyltransferase-like 7
vvi-u.5	100243965	probable galacturonosyltransferase-like 10
vvi-u.5	100241606	probable galacturonosyltransferase-like 9
ppo-u.5	18102386	probable galacturonosyltransferase-like 9
ppo-u.5	7478857	probable galacturonosyltransferase-like 7
ppo-u.5	7491279	probable galacturonosyltransferase-like 7
mtr-u.5	11430017	probable galacturonosyltransferase-like 7
mtr-u.5	11444359	probable galacturonosyltransferase-like 10
mtr-u.5	11414397	probable galacturonosyltransferase-like 9
sly-u.5	101246345	probable galacturonosyltransferase-like 9
sly-u.5	101262558	probable galacturonosyltransferase-like 7
sly-u.5	101265190	probable galacturonosyltransferase-like 10
sot-r.1	102603101	probable galacturonosyltransferase-like 10
sot-r.1	102583903	probable galacturonosyltransferase-like 7
sot-r.1	102583441	probable galacturonosyltransferase-like 9
nta-r.1	107814676	putative galacturonosyltransferase-like 9
nta-r.1	107803382	putative galacturonosyltransferase-like 9
nta-r.1	107794658	putative galacturonosyltransferase-like 9
osa-u.5	4330672	probable galacturonosyltransferase-like 9
osa-u.5	4332572	probable galacturonosyltransferase-like 7
osa-u.5	4340642	probable galacturonosyltransferase-like 9
zma-u.5	100217291	putative galacturonosyltransferase-like 9
zma-u.5	100191914	putative galacturonosyltransferase-like 7
zma-u.5	100191794	uncharacterized LOC100191794
tae-r.2	123085634	probable galacturonosyltransferase-like 7
tae-r.2	123092394	probable galacturonosyltransferase-like 7
tae-r.2	123097714	probable galacturonosyltransferase-like 7
hvu-r.1	123448857	probable galacturonosyltransferase-like 7
hvu-r.1	123412159	probable galacturonosyltransferase-like 9
sbi-r.1	8075735	probable galacturonosyltransferase-like 9
sbi-r.1	8061497	probable galacturonosyltransferase-like 9
sbi-r.1	8081103	probable galacturonosyltransferase-like 7
bdi-r.1	100842863	probable galacturonosyltransferase-like 2
bdi-r.1	100841465	probable galacturonosyltransferase-like 7

Top 50 coexpressed genes to 103828935 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103828935 (bra-r.6 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

probable galacturonosyltransferase-like 6

KEGG

GO BP

GO CC

GO:0005794 [list] [network] Golgi apparatus

(770 genes)

IEA

GO MF

GO:0016757 [list] [network] glycosyltransferase activity

(725 genes)

IEA

Protein

XP_009102816.1 [sequence] [blastp]
XP_009102817.1 [sequence] [blastp]
XP_009102818.1 [sequence] [blastp]
XP_033142078.1 [sequence] [blastp]
XP_033142079.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, vacu 4, extr 1	(predict for XP_009102816.1)
chlo 5, vacu 4, extr 1	(predict for XP_009102817.1)
chlo 5, vacu 4, extr 1	(predict for XP_009102818.1)
chlo 5, vacu 4, extr 1	(predict for XP_033142078.1)
chlo 5, vacu 4, extr 1	(predict for XP_033142079.1)

Subcellular
localization
TargetP

scret 5	(predict for XP_009102816.1)
scret 5	(predict for XP_009102817.1)
scret 5	(predict for XP_009102818.1)
scret 5	(predict for XP_033142078.1)
scret 5	(predict for XP_033142079.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103828935	bra-r.6 for 103829229	bra-r.6 for 103830363	bra-r.6 for 103831556	bna-r.1 for 111212730	bna-r.1 for 125576505	ath-u.5 for GATL10	ath-u.5 for GATL7	ath-u.5 for GATL6	ghi-r.1 for 107886320	ghi-r.1 for 107886627	ghi-r.1 for 107903691	cit-r.1 for 102612425	cit-r.1 for 102613476	cit-r.1 for 102622159	gma-u.5 for 100780084	gma-u.5 for 100813364	gma-u.5 for 100812586	vvi-u.5 for 100265777	vvi-u.5 for 100243965	vvi-u.5 for 100241606	ppo-u.5 for 18102386	ppo-u.5 for 7478857	ppo-u.5 for 7491279	mtr-u.5 for 11430017	mtr-u.5 for 11444359	mtr-u.5 for 11414397	sly-u.5 for 101246345	sly-u.5 for 101262558	sly-u.5 for 101265190	sot-r.1 for 102603101	sot-r.1 for 102583903	sot-r.1 for 102583441	nta-r.1 for 107814676	nta-r.1 for 107803382	nta-r.1 for 107794658	osa-u.5 for 4330672	osa-u.5 for 4332572	osa-u.5 for 4340642	zma-u.5 for 100217291	zma-u.5 for 100191914	zma-u.5 for 100191794	tae-r.2 for 123085634	tae-r.2 for 123092394	tae-r.2 for 123097714	hvu-r.1 for 123448857	hvu-r.1 for 123412159	sbi-r.1 for 8075735	sbi-r.1 for 8061497	sbi-r.1 for 8081103	bdi-r.1 for 100842863	bdi-r.1 for 100841465

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Ortholog

Ortholog ID: 765

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

GATL6

GATL5

LGT8

Function^*

probable galacturonosyltransferase-like 9

probable galacturonosyltransferase-like 10

probable galacturonosyltransferase-like 6