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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103836952   CCR4-NOT transcription complex subunit 1 
 bna-r.1   106431742   CCR4-NOT transcription complex subunit 1 
 bna-r.1   125593369   CCR4-NOT transcription complex subunit 1-like 

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Top 50 coexpressed genes to 103836952 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103836952 (bra-r.6 coexpression data)

CoexMap"103836952"


braLOC103836952 | Entrez gene ID : 103836952    
Species bra bna osa sot sly cit ath ppo ghi bdi sbi gma mtr tae hvu vvi zma cre nta
Paralog 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03018 [list] [network] RNA degradation (187 genes)
GO BP
GO:0000288 [list] [network] nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay  (44 genes)  IEA  
GO CC
GO:0030015 [list] [network] CCR4-NOT core complex  (37 genes)  IEA  
GO:0000932 [list] [network] P-body  (83 genes)  IEA  
GO MF
GO:0060090 [list] [network] molecular adaptor activity  (318 genes)  IEA  
Protein XP_009111526.1 [sequence] [blastp]
XP_033136952.1 [sequence] [blastp]
XP_033136953.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 1,  plas 1,  mito_plas 1,  nucl 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_009111526.1)
plas 4,  vacu 2,  E.R. 2,  E.R._vacu 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for XP_033136952.1)
chlo 4,  nucl 1,  mito 1,  cysk_nucl 1,  cyto 1,  plas 1,  extr 1,  vacu 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_033136953.1)
Subcellular
localization
TargetP
other 4,  scret 4  (predict for XP_009111526.1)
scret 9  (predict for XP_033136952.1)
other 4,  scret 4  (predict for XP_033136953.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103836952
bna-r.1
for
106431742
bna-r.1
for
125593369


Ortholog ID: 26899
Species bra bna bna
Symbol LOC103836952 LOC106431742 LOC125593369
Function* CCR4-NOT transcription complex subunit 1 CCR4-NOT transcription complex subunit 1 CCR4-NOT transcription complex subunit 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103836952 106431742 125593369
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