ATTED-II : GeneCoexpression result

Species	Gene	Description
bra-r.6	103850865	uncharacterized LOC103850865
bra-r.6	103846576	uncharacterized LOC103846576
bna-r.1	111209964	uncharacterized LOC111209964
bna-r.1	106372298	uncharacterized LOC106372298
bna-r.1	106384118	uncharacterized LOC106384118
ath-u.5	NEF1	no exine formation 1
ghi-r.1	107933084	uncharacterized LOC107933084
ghi-r.1	107938467	uncharacterized LOC107938467
cit-r.1	102626431	uncharacterized LOC102626431
gma-u.5	100819962	uncharacterized LOC100819962
gma-u.5	100808864	uncharacterized LOC100808864
vvi-u.5	100259097	uncharacterized LOC100259097
ppo-u.5	7497575	uncharacterized LOC7497575
ppo-u.5	7491440	uncharacterized LOC7491440
mtr-u.5	11422374	uncharacterized LOC11422374
sly-u.5	101250387	uncharacterized LOC101250387
sot-r.1	102590385	uncharacterized LOC102590385
nta-r.1	107769077	uncharacterized LOC107769077
nta-r.1	107821185	uncharacterized LOC107821185
osa-u.5	4350628	uncharacterized LOC4350628
zma-u.5	103648029	no exine formation 1
tae-r.2	123119241	uncharacterized LOC123119241
tae-r.2	123110195	uncharacterized LOC123110195
tae-r.2	123102076	uncharacterized LOC123102076
hvu-r.1	123398909	uncharacterized LOC123398909
sbi-r.1	8083166	uncharacterized LOC8083166
bdi-r.1	100830867	uncharacterized LOC100830867
cre-r.1	CHLRE_01g018050v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_009125907.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 2, golg 2

(predict for XP_009125907.2)

Subcellular
localization
TargetP

chlo 6

(predict for XP_009125907.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103850865	bra-r.6 for 103846576	bna-r.1 for 111209964	bna-r.1 for 106372298	bna-r.1 for 106384118	ath-u.5 for NEF1	ghi-r.1 for 107933084	ghi-r.1 for 107938467	cit-r.1 for 102626431	gma-u.5 for 100819962	gma-u.5 for 100808864	vvi-u.5 for 100259097	ppo-u.5 for 7497575	ppo-u.5 for 7491440	mtr-u.5 for 11422374	sly-u.5 for 101250387	sot-r.1 for 102590385	nta-r.1 for 107769077	nta-r.1 for 107821185	osa-u.5 for 4350628	zma-u.5 for 103648029	tae-r.2 for 123119241	tae-r.2 for 123110195	tae-r.2 for 123102076	hvu-r.1 for 123398909	sbi-r.1 for 8083166	bdi-r.1 for 100830867	cre-r.1 for CHLRE_01g018050v5

Ortholog

Ortholog ID: 8131

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

NEF1

Function^*

uncharacterized LOC103850865

uncharacterized LOC103846576

uncharacterized LOC111209964

uncharacterized LOC106372298

uncharacterized LOC106345853

no exine formation 1

uncharacterized LOC107933084

uncharacterized LOC107938467

uncharacterized LOC102626431

uncharacterized LOC100819962

uncharacterized LOC100808864

uncharacterized LOC100259097

uncharacterized LOC7497575

uncharacterized LOC7491440

uncharacterized LOC11422374

uncharacterized LOC101250387

uncharacterized LOC102590385

uncharacterized LOC107769077

uncharacterized LOC107821185

uncharacterized LOC4350628

no exine formation 1

uncharacterized LOC123119241

uncharacterized LOC123110195

uncharacterized LOC123102076

uncharacterized LOC123398909

uncharacterized LOC8083166

uncharacterized LOC100830867

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	4
bra04120	Ubiquitin mediated proteolysis	2
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	6
ath00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00510	N-Glycan biosynthesis	3
vvi03040	Spliceosome	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	4
ppo03013	Nucleocytoplasmic transport	3
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	4
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2
mtr03013	Nucleocytoplasmic transport	2
mtr03250	Viral life cycle - HIV-1	2
mtr03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	6
sly00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	5
nta04141	Protein processing in endoplasmic reticulum	4
nta03060	Protein export	2
nta04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	5
nta04141	Protein processing in endoplasmic reticulum	4
nta03060	Protein export	2
nta04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	9
zma00510	N-Glycan biosynthesis	5
zma00513	Various types of N-glycan biosynthesis	3
zma03018	RNA degradation	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	4
tae04141	Protein processing in endoplasmic reticulum	4
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	4
tae04141	Protein processing in endoplasmic reticulum	3
tae00230	Purine metabolism	3
tae00240	Pyrimidine metabolism	3
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	5
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	3
sbi04144	Endocytosis	2
sbi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

103850865

103846576

111209964

106372298

106345853

831180

107933084

107938467

102626431

100819962

100808864

100259097

7497575

7491440

11422374

101250387

102590385

107769077

107821185

4350628

103648029

123119241

123110195

123102076

123398909

8083166

100830867

5715152

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103850865 (bra-r.6 coexpression data)

Top 50 enrichment test to 103850865 (bra-r.6 coexpression data)


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	3	1	2	1	2	1	2	1	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103850865 (bra-r.6 coexpression data)

Top 50 enrichment test to 103850865 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**