ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103866498	fimbrin-1
bra-r.6	103849200	fimbrin-5
bra-r.6	103856991	fimbrin-3
bra-r.6	103838027	fimbrin-4
bna-r.1	111211583	fimbrin-3-like
ath-u.5	FIM1	fimbrin 1
ath-u.5	FIM5	fimbrin-like protein 2
ghi-r.1	107922269	fimbrin-1
ghi-r.1	107917821	fimbrin-1
ghi-r.1	107924703	fimbrin-2
cit-r.1	102624470	fimbrin-2
cit-r.1	102629000	fimbrin-1
cit-r.1	102621924	fimbrin-5
gma-u.5	100793464	fimbrin-2
gma-u.5	100794850	fimbrin-1
gma-u.5	100799696	fimbrin-2
vvi-u.5	100248725	fimbrin-1
vvi-u.5	100260224	fimbrin-2
ppo-u.5	7484257	fimbrin-1
ppo-u.5	7483611	fimbrin-1
mtr-u.5	11437090	fimbrin-1
mtr-u.5	11425294	fimbrin-5
mtr-u.5	11434024	fimbrin-2
sly-u.5	101262133	fimbrin-1
sly-u.5	101257507	fimbrin-2
sly-u.5	101257576	fimbrin-2
sot-r.1	102587180	fimbrin-2-like
sot-r.1	102596528	fimbrin-1-like
nta-r.1	107759696	fimbrin-2-like
nta-r.1	107817925	fimbrin-1
nta-r.1	107811734	fimbrin-2
osa-u.5	4329816	fimbrin-5
osa-u.5	4330541	fimbrin-4
osa-u.5	4323993	fimbrin-2
zma-u.5	103627657	fimbrin-4
zma-u.5	103627357	fimbrin-5
zma-u.5	100281499	fimbrin 1
tae-r.2	123138025	fimbrin-4
tae-r.2	123137150	fimbrin-5
hvu-r.1	123405533	fimbrin-5-like
hvu-r.1	123443586	fimbrin-2-like
sbi-r.1	8071774	fimbrin-4
sbi-r.1	8075510	fimbrin-2
bdi-r.1	100841231	fimbrin-4
bdi-r.1	100840402	fimbrin-4
bdi-r.1	100831539	fimbrin-2
cre-r.1	CHLRE_16g679650v5	uncharacterized protein

Top 50 coexpressed genes to 103866498 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103866498 (bra-r.6 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

fimbrin-1

KEGG

GO BP

GO:0051639 [list] [network] actin filament network formation	(6 genes)	IEA
GO:0051017 [list] [network] actin filament bundle assembly	(22 genes)	IEA

GO CC

GO:0005884 [list] [network] actin filament	(6 genes)	IEA
GO:0032432 [list] [network] actin filament bundle	(6 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(7940 genes)	IEA

GO MF

GO:0051015 [list] [network] actin filament binding

(120 genes)

IEA

Protein

XP_009142687.1 [sequence] [blastp]
XP_009142695.1 [sequence] [blastp]
XP_009142703.1 [sequence] [blastp]
XP_018511783.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, cyto 3	(predict for XP_009142687.1)
nucl 4, chlo 3, cyto 3	(predict for XP_009142695.1)
nucl 4, chlo 3, cyto 3	(predict for XP_009142703.1)
cyto 5, chlo 4, nucl 1	(predict for XP_018511783.1)

Subcellular
localization
TargetP

other 4	(predict for XP_009142687.1)
other 4	(predict for XP_009142695.1)
other 4	(predict for XP_009142703.1)
other 6, chlo 4	(predict for XP_018511783.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103866498	bra-r.6 for 103849200	bra-r.6 for 103856991	bra-r.6 for 103838027	bna-r.1 for 111211583	ath-u.5 for FIM1	ath-u.5 for FIM5	ghi-r.1 for 107922269	ghi-r.1 for 107917821	ghi-r.1 for 107924703	cit-r.1 for 102624470	cit-r.1 for 102629000	cit-r.1 for 102621924	gma-u.5 for 100793464	gma-u.5 for 100794850	gma-u.5 for 100799696	vvi-u.5 for 100248725	vvi-u.5 for 100260224	ppo-u.5 for 7484257	ppo-u.5 for 7483611	mtr-u.5 for 11437090	mtr-u.5 for 11425294	mtr-u.5 for 11434024	sly-u.5 for 101262133	sly-u.5 for 101257507	sly-u.5 for 101257576	sot-r.1 for 102587180	sot-r.1 for 102596528	nta-r.1 for 107759696	nta-r.1 for 107817925	nta-r.1 for 107811734	osa-u.5 for 4329816	osa-u.5 for 4330541	osa-u.5 for 4323993	zma-u.5 for 103627657	zma-u.5 for 103627357	zma-u.5 for 100281499	tae-r.2 for 123138025	tae-r.2 for 123137150	hvu-r.1 for 123405533	hvu-r.1 for 123443586	sbi-r.1 for 8071774	sbi-r.1 for 8075510	bdi-r.1 for 100841231	bdi-r.1 for 100840402	bdi-r.1 for 100831539	cre-r.1 for CHLRE_16g679650v5

Please wait a moment.

Ortholog

Ortholog ID: 717

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

FIM5

Function^*

fimbrin-4

fimbrin-2

fimbrin-5

fimbrin-3

fimbrin-2

fimbrin-5

fimbrin-like protein 2

Actin binding Calponin homology (CH) domain-containing protein

fimbrin-5

fimbrin-2

fimbrin-1

fimbrin-2

fimbrin-1

fimbrin-5

fimbrin-2

fimbrin-1

fimbrin-2

fimbrin-1

fimbrin-2

fimbrin-1

fimbrin-5

fimbrin-2

fimbrin-1

fimbrin-2

fimbrin-2-like

fimbrin-2

fimbrin-5

fimbrin-4

fimbrin-2

fimbrin-4

fimbrin-5

fimbrin 1

fimbrin-2

fimbrin-4

fimbrin-2-like

fimbrin-4-like

fimbrin-4

fimbrin-2

fimbrin-4

fimbrin-2

fimbrin-5

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2
bra01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	5
bna04626	Plant-pathogen interaction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	9
bna03015	mRNA surveillance pathway	4
bna04382	Cornified envelope formation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00562	Inositol phosphate metabolism	3
ath04070	Phosphatidylinositol signaling system	3
ath04144	Endocytosis	3
ath04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04712	Circadian rhythm - plant	2
ghi00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	4
gma00190	Oxidative phosphorylation	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	2
vvi00562	Inositol phosphate metabolism	2
vvi04070	Phosphatidylinositol signaling system	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	3
ppo00900	Terpenoid backbone biosynthesis	2
ppo00562	Inositol phosphate metabolism	2
ppo00564	Glycerophospholipid metabolism	2
ppo00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	2
ppo04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	3
mtr04146	Peroxisome	3
mtr00071	Fatty acid degradation	2
mtr00410	beta-Alanine metabolism	2
mtr00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	5
osa04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	3
zma04142	Lysosome	2
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
tae00999	Biosynthesis of various plant secondary metabolites	2
tae01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	2
tae00565	Ether lipid metabolism	2
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00564	Glycerophospholipid metabolism	2
hvu00565	Ether lipid metabolism	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	5
sbi00270	Cysteine and methionine metabolism	2
sbi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	2
bdi04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

103838027

103837254

103833692

106345991

106428167

106390794

833544

834901

835633

107955733

107912516

121209367

102624470

102629000

102621924

100793464

100805133

100810854

100248725

100260224

7484257

7483611

7459519

11437090

11425294

11434024

101262133

101257507

101257576

102587180

102594188

107759696

107798909

4329816

4330541

4323993

103627657

103627357

100281499

123069768

543247

123443586

123401473

8071774

8075510

100841231

100831539

100821426

5721541

The preparation time of this page was 0.2 [sec].


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	2	3	3	3	2	2	3	3	2	3	3	3	2	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103866498 (bra-r.6 coexpression data)

Top 50 enrichment test to 103866498 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**