ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-m.5	100799161	PPPDE peptidase domain-containing protein 2-like
gma-u.5	100799161	PPPDE peptidase domain-containing protein 2-like
gma-r.7	100799161	PPPDE peptidase domain-containing protein 2-like
gma-u.5	100787486	desumoylating isopeptidase 1
mtr-u.5	11418752	desumoylating isopeptidase 1
ppo-u.5	7488626	uncharacterized LOC7488626
ath-u.5	AT3G07090	PPPDE putative thiol peptidase family protein
bra-r.6	103870704	desumoylating isopeptidase 1
bra-r.6	103849519	desumoylating isopeptidase 1
vvi-u.5	100249956	uncharacterized LOC100249956
ghi-r.1	107962818	desumoylating isopeptidase 1
ghi-r.1	107939000	desumoylating isopeptidase 1
ghi-r.1	107924547	deSI-like protein At4g17486
bna-r.1	125590351	uncharacterized LOC125590351
bna-r.1	106452973	desumoylating isopeptidase 1-like
bna-r.1	106389699	desumoylating isopeptidase 1-like
cit-r.1	102620364	uncharacterized LOC102620364
sly-u.5	101257806	uncharacterized LOC101257806
sot-r.1	102583887	desumoylating isopeptidase 1
nta-r.1	107759334	uncharacterized LOC107759334
nta-r.1	107822016	uncharacterized LOC107822016
osa-u.5	4331115	uncharacterized LOC4331115
osa-u.5	4348873	uncharacterized LOC4348873
zma-u.5	103626173	desumoylating isopeptidase 1
zma-u.5	100283457	uncharacterized LOC100283457
tae-r.2	123128941	desumoylating isopeptidase 1
tae-r.2	123139665	desumoylating isopeptidase 1
tae-r.2	123146103	desumoylating isopeptidase 1
hvu-r.1	123430785	uncharacterized protein KIAA0754-like
hvu-r.1	123403432	desumoylating isopeptidase 1
sbi-r.1	110430021	desumoylating isopeptidase 1-like
sbi-r.1	8084697	desumoylating isopeptidase 1
bdi-r.1	100842155	desumoylating isopeptidase 1
cre-r.1	CHLRE_12g555850v5	uncharacterized protein

Top 50 coexpressed genes to 100799161 (gma-m.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100799161 (gma-m.5 coexpression data)

CoexMap"100799161"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0070646 [list] [network] protein modification by small protein removal

(146 genes)

IEA

GO CC

GO MF

GO:0008233 [list] [network] peptidase activity

(1000 genes)

IEA

Protein

NP_001241245.1 [sequence] [blastp]
XP_006601819.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, nucl 1, nucl_plas 1	(predict for NP_001241245.1)
cyto 8, nucl 1, nucl_plas 1	(predict for XP_006601819.1)

Subcellular
localization
TargetP

other 6	(predict for NP_001241245.1)
other 6	(predict for XP_006601819.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-m.5 for 100799161	gma-u.5 for 100799161	gma-r.7 for 100799161	gma-u.5 for 100787486	mtr-u.5 for 11418752	ppo-u.5 for 7488626	ath-u.5 for AT3G07090	bra-r.6 for 103870704	bra-r.6 for 103849519	vvi-u.5 for 100249956	ghi-r.1 for 107962818	ghi-r.1 for 107939000	ghi-r.1 for 107924547	bna-r.1 for 125590351	bna-r.1 for 106452973	bna-r.1 for 106389699	cit-r.1 for 102620364	sly-u.5 for 101257806	sot-r.1 for 102583887	nta-r.1 for 107759334	nta-r.1 for 107822016	osa-u.5 for 4331115	osa-u.5 for 4348873	zma-u.5 for 103626173	zma-u.5 for 100283457	tae-r.2 for 123128941	tae-r.2 for 123139665	tae-r.2 for 123146103	hvu-r.1 for 123430785	hvu-r.1 for 123403432	sbi-r.1 for 110430021	sbi-r.1 for 8084697	bdi-r.1 for 100842155	cre-r.1 for CHLRE_12g555850v5

Ortholog

Ortholog ID: 6255

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

PPPDE peptidase domain-containing protein 2-like

desumoylating isopeptidase 1

uncharacterized LOC7488626

PPPDE putative thiol peptidase family protein

desumoylating isopeptidase 1

uncharacterized LOC100249956

desumoylating isopeptidase 1

deSI-like protein At4g17486

uncharacterized LOC125590351

desumoylating isopeptidase 1-like

uncharacterized LOC102620364

uncharacterized LOC101257806

desumoylating isopeptidase 1

uncharacterized LOC107759334

uncharacterized LOC107822016

uncharacterized LOC4331115

uncharacterized LOC4348873

desumoylating isopeptidase 1

uncharacterized LOC100283457

desumoylating isopeptidase 1

uncharacterized protein KIAA0754-like

desumoylating isopeptidase 1

desumoylating isopeptidase 1-like

desumoylating isopeptidase 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	9
gma03040	Spliceosome	2
gma04144	Endocytosis	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr04626	Plant-pathogen interaction	3
mtr03040	Spliceosome	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	5
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	9
ath03040	Spliceosome	3
ath04144	Endocytosis	3
ath04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	3
bra01200	Carbon metabolism	3
bra04148	Efferocytosis	2
bra00020	Citrate cycle (TCA cycle)	2
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00020	Citrate cycle (TCA cycle)	2
bra01200	Carbon metabolism	2
bra01210	2-Oxocarboxylic acid metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	4
ghi04626	Plant-pathogen interaction	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00440	Phosphonate and phosphinate metabolism	2
bna00564	Glycerophospholipid metabolism	2
bna00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00440	Phosphonate and phosphinate metabolism	2
bna00564	Glycerophospholipid metabolism	2
bna00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00440	Phosphonate and phosphinate metabolism	2
bna00564	Glycerophospholipid metabolism	2
bna00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00730	Thiamine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	5
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4
sot04141	Protein processing in endoplasmic reticulum	3
sot04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	5
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	6
tae03040	Spliceosome	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	6
tae03040	Spliceosome	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	2
sbi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	5
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	14

Expression

Expression pattern

Entrez Gene ID^*

100799161

100787486

11418752

7488626

819895

103870704

103849519

100249956

107939000

107924547

107912579

125590351

106389699

111197769

102620364

101257806

102583887

107759334

107822016

4331115

4348873

103626173

100283457

123128941

123139665

123146103

123430785

123403432

110430021

8084697

100842155

5719742

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	1	1	2	1	3	3	1	1	1	2	2	2	3	2	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100799161 (gma-m.5 coexpression data)

Top 50 enrichment test to 100799161 (gma-m.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**