ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-m.5	100799508	uncharacterized LOC100799508
gma-u.5	100799508	uncharacterized LOC100799508
gma-r.7	100799508	uncharacterized LOC100799508
gma-u.5	100791735	uncharacterized LOC100791735
mtr-u.5	25490845	uncharacterized LOC25490845
ppo-u.5	7468573	uncharacterized LOC7468573
ppo-u.5	7478540	uncharacterized LOC7478540
ath-u.5	AT2G29670	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-u.5	AT3G47080	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-u.5	AT1G07280	Tetratricopeptide repeat (TPR)-like superfamily protein
bra-r.6	103864985	uncharacterized LOC103864985
bra-r.6	103843960	uncharacterized LOC103843960
vvi-u.5	100253483	uncharacterized LOC100253483
ghi-r.1	107886041	uncharacterized LOC107886041
ghi-r.1	107928747	uncharacterized LOC107928747
ghi-r.1	107954195	uncharacterized LOC107954195
bna-r.1	125603547	uncharacterized LOC125603547
bna-r.1	125578623	uncharacterized LOC125578623
bna-r.1	125575086	uncharacterized LOC125575086
cit-r.1	102615835	uncharacterized LOC102615835
cit-r.1	102614483	uncharacterized LOC102614483
sly-u.5	101258865	uncharacterized LOC101258865
sot-r.1	102586166	uncharacterized LOC102586166
nta-r.1	107784835	uncharacterized LOC107784835
nta-r.1	107816898	uncharacterized LOC107816898
osa-u.5	4338950	uncharacterized LOC4338950
osa-u.5	4324827	uncharacterized LOC4324827
zma-u.5	100501832	uncharacterized LOC100501832
zma-u.5	100277843	uncharacterized LOC100277843
zma-u.5	100275415	uncharacterized LOC100275415
tae-r.2	123062635	uncharacterized LOC123062635
tae-r.2	123058273	uncharacterized LOC123058273
tae-r.2	123071455	uncharacterized LOC123071455
hvu-r.1	123444864	uncharacterized LOC123444864
hvu-r.1	123445924	uncharacterized LOC123445924
sbi-r.1	8061745	uncharacterized LOC8061745
sbi-r.1	8058931	uncharacterized LOC8058931
bdi-r.1	100833559	uncharacterized LOC100833559
bdi-r.1	100826542	uncharacterized LOC100826542

Top 50 coexpressed genes to 100799508 (gma-m.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100799508 (gma-m.5 coexpression data)

CoexMap"100799508"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006396 [list] [network] RNA processing

(1008 genes)

IEA

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(7243 genes)

IEA

Protein

XP_003551315.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 2, mito 1, vacu 1

(predict for XP_003551315.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_003551315.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-m.5 for 100799508	gma-u.5 for 100799508	gma-r.7 for 100799508	gma-u.5 for 100791735	mtr-u.5 for 25490845	ppo-u.5 for 7468573	ppo-u.5 for 7478540	ath-u.5 for AT2G29670	ath-u.5 for AT3G47080	ath-u.5 for AT1G07280	bra-r.6 for 103864985	bra-r.6 for 103843960	vvi-u.5 for 100253483	ghi-r.1 for 107886041	ghi-r.1 for 107928747	ghi-r.1 for 107954195	bna-r.1 for 125603547	bna-r.1 for 125578623	bna-r.1 for 125575086	cit-r.1 for 102615835	cit-r.1 for 102614483	sly-u.5 for 101258865	sot-r.1 for 102586166	nta-r.1 for 107784835	nta-r.1 for 107816898	osa-u.5 for 4338950	osa-u.5 for 4324827	zma-u.5 for 100501832	zma-u.5 for 100277843	zma-u.5 for 100275415	tae-r.2 for 123062635	tae-r.2 for 123058273	tae-r.2 for 123071455	hvu-r.1 for 123444864	hvu-r.1 for 123445924	sbi-r.1 for 8061745	sbi-r.1 for 8058931	bdi-r.1 for 100833559	bdi-r.1 for 100826542

Ortholog

Ortholog ID: 2795

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100799508

uncharacterized LOC100791735

uncharacterized LOC25490845

uncharacterized LOC7468573

uncharacterized LOC7478540

Tetratricopeptide repeat (TPR)-like superfamily protein

uncharacterized LOC103843960

uncharacterized LOC103843466

uncharacterized LOC103868016

uncharacterized LOC100253483

uncharacterized LOC107886041

uncharacterized LOC107928747

uncharacterized LOC107954195

uncharacterized LOC106446930

uncharacterized LOC106400821

uncharacterized LOC106371352

uncharacterized LOC102615835

uncharacterized LOC102614483

uncharacterized LOC101258865

uncharacterized LOC102586166

uncharacterized LOC107784835

uncharacterized LOC107816898

uncharacterized LOC4338950

uncharacterized LOC4324827

uncharacterized LOC100501832

uncharacterized LOC100277843

uncharacterized LOC100275225

uncharacterized LOC123062635

uncharacterized LOC123058273

uncharacterized LOC123079795

uncharacterized LOC123444864

uncharacterized LOC123445924

uncharacterized LOC8061745

uncharacterized LOC8058931

uncharacterized LOC100833559

uncharacterized LOC100826542

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	7
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	3
vvi01240	Biosynthesis of cofactors	2
vvi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	2
bna00350	Tyrosine metabolism	2
bna00360	Phenylalanine metabolism	2
bna00410	beta-Alanine metabolism	2
bna00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	8
bna00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	5
sly00520	Amino sugar and nucleotide sugar metabolism	4
sly01250	Biosynthesis of nucleotide sugars	4
sly01240	Biosynthesis of cofactors	2
sly00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	10
sot00520	Amino sugar and nucleotide sugar metabolism	4
sot01250	Biosynthesis of nucleotide sugars	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	3
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00730	Thiamine metabolism	2
sbi01240	Biosynthesis of cofactors	2
sbi04712	Circadian rhythm - plant	2
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00196	Photosynthesis - antenna proteins	2

Expression

Expression pattern

Entrez Gene ID^*

100799508

100791735

25490845

7468573

7478540

817517

823861

837239

103843960

103843466

103868016

100253483

107886041

107928747

107954195

106446930

106400821

106371352

102615835

102614483

101258865

102586166

107784835

107816898

4338950

4324827

100501832

100277843

100275225

123062635

123058273

123079795

123444864

123445924

8061745

8058931

100833559

100826542

The preparation time of this page was 0.1 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	2	3	2	1	3	3	2	1	1	2	2	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100799508 (gma-m.5 coexpression data)

Top 50 enrichment test to 100799508 (gma-m.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**