ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-r.7	100500415	uncharacterized LOC100500415
gma-u.5	100500415	uncharacterized LOC100500415
gma-m.5	100500415	uncharacterized LOC100500415
gma-u.5	100527898	uncharacterized LOC100527898
gma-u.5	100777109	uncharacterized LOC100777109
gma-u.5	100305662	uncharacterized LOC100305662
mtr-u.5	11441804	uncharacterized LOC11441804
mtr-u.5	11409094	uncharacterized LOC11409094
mtr-u.5	25480778	uncharacterized LOC25480778
ppo-u.5	18095582	uncharacterized LOC18095582
ppo-u.5	7460819	uncharacterized LOC7460819
ppo-u.5	7456792	uncharacterized LOC7456792
ath-u.5	AT1G53035	uncharacterized protein
ath-u.5	AT3G15358	uncharacterized protein
bra-r.6	103871161	uncharacterized LOC103871161
bra-r.6	103869932	uncharacterized LOC103869932
vvi-u.5	100255813	uncharacterized LOC100255813
vvi-u.5	100260596	uncharacterized LOC100260596
ghi-r.1	107905782	uncharacterized LOC107905782
ghi-r.1	107903566	uncharacterized LOC107903566
bna-r.1	BNAA05G24220D	uncharacterized BNAA05G24220D
cit-r.1	102625648	hypothetical protein
cit-r.1	102626252	uncharacterized LOC102626252
sly-u.5	101266980	uncharacterized LOC101266980
sot-r.1	102593512	uncharacterized LOC102593512
sot-r.1	102597606	uncharacterized LOC102597606
nta-r.1	107792182	uncharacterized LOC107792182
nta-r.1	107797560	uncharacterized LOC107797560

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001237702.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, vacu 2, nucl_plas 2, cysk_plas 2, E.R._plas 2

(predict for NP_001237702.2)

Subcellular
localization
TargetP

scret 9

(predict for NP_001237702.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-r.7 for 100500415	gma-u.5 for 100500415	gma-m.5 for 100500415	gma-u.5 for 100527898	gma-u.5 for 100777109	gma-u.5 for 100305662	mtr-u.5 for 11441804	mtr-u.5 for 11409094	mtr-u.5 for 25480778	ppo-u.5 for 18095582	ppo-u.5 for 7460819	ppo-u.5 for 7456792	ath-u.5 for AT1G53035	ath-u.5 for AT3G15358	bra-r.6 for 103871161	bra-r.6 for 103869932	vvi-u.5 for 100255813	vvi-u.5 for 100260596	ghi-r.1 for 107905782	ghi-r.1 for 107903566	bna-r.1 for BNAA05G24220D	cit-r.1 for 102625648	cit-r.1 for 102626252	sly-u.5 for 101266980	sot-r.1 for 102593512	sot-r.1 for 102597606	nta-r.1 for 107792182	nta-r.1 for 107797560

Ortholog

Ortholog ID: 3172

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

Symbol

Function^*

uncharacterized LOC100527898

uncharacterized LOC100527881

uncharacterized LOC11441804

uncharacterized LOC11409094

uncharacterized LOC25480778

uncharacterized LOC7460819

uncharacterized LOC7456792

uncharacterized protein

uncharacterized LOC103871161

uncharacterized LOC103840829

uncharacterized LOC100255813

uncharacterized LOC100260596

uncharacterized LOC107952672

uncharacterized LOC121216784

uncharacterized LOC107895351

uncharacterized LOC106406668

hypothetical protein

uncharacterized LOC102626252

uncharacterized LOC101266980

uncharacterized LOC102593512

uncharacterized LOC102597606

uncharacterized LOC107792182

uncharacterized LOC107797560

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03082	ATP-dependent chromatin remodeling	2
mtr00510	N-Glycan biosynthesis	2
mtr00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	5
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00330	Arginine and proline metabolism	2
bra00410	beta-Alanine metabolism	2
bra00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	5
vvi04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	3
bna03010	Ribosome	2
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	4
sot04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta00500	Starch and sucrose metabolism	2
nta00730	Thiamine metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta00500	Starch and sucrose metabolism	2
nta00730	Thiamine metabolism	2
nta01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

100527898

100527881

11441804

11409094

25480778

7460819

7456792

841737

2745884

103871161

103840829

100255813

100260596

107952672

121216784

107895351

106406668

102625648

102626252

101266980

102593512

102597606

107792182

107797560

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100500415 (gma-r.7 coexpression data)

Top 50 enrichment test to 100500415 (gma-r.7 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	sbi	osa	tae	hvu	zma	cre	bdi
Paralog	6	3	3	2	2	2	2	1	2	1	2	2	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100500415 (gma-r.7 coexpression data)

Top 50 enrichment test to 100500415 (gma-r.7 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**