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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-r.7   100778661   putative exosome complex component rrp40 
 gma-u.5   100778661   putative exosome complex component rrp40 

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Top 50 coexpressed genes to 100778661 (gma-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100778661 (gma-r.7 coexpression data)

CoexMap""


gmaLOC100778661 | Entrez gene ID : 100778661    
Species gma bra sot mtr tae ppo cit bdi cre zma ghi bna nta hvu osa sbi vvi ath sly
Paralog 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function putative exosome complex component rrp40
KEGG gmx03018 [list] [network] RNA degradation (191 genes)
GO BP
GO:0071034 [list] [network] CUT catabolic process  (9 genes)  IEA  
GO:0071035 [list] [network] nuclear polyadenylation-dependent rRNA catabolic process  (17 genes)  IEA  
GO:0071038 [list] [network] TRAMP-dependent tRNA surveillance pathway  (17 genes)  IEA  
GO:0071051 [list] [network] poly(A)-dependent snoRNA 3'-end processing  (17 genes)  IEA  
GO:0000467 [list] [network] exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (18 genes)  IEA  
GO:0034475 [list] [network] U4 snRNA 3'-end processing  (20 genes)  IEA  
GO CC
GO:0000177 [list] [network] cytoplasmic exosome (RNase complex)  (23 genes)  IEA  
GO:0000176 [list] [network] nuclear exosome (RNase complex)  (30 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_025982822.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  nucl 2,  extr 2,  cyto_E.R. 2,  chlo 1  (predict for XP_025982822.2)
Subcellular
localization
TargetP
other 8  (predict for XP_025982822.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target

gma-r.7
for
100778661
gma-u.5
for
100778661

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Ortholog ID: 92458
Species gma
Symbol LOC100778661
Function* putative exosome complex component rrp40
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
gma01240 Biosynthesis of cofactors 2
gma00941 Flavonoid biosynthesis 2
gma00280 Valine, leucine and isoleucine degradation 2
Expression Expression pattern
Entrez Gene ID* 100778661
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