ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-r.7	100779584	valine--tRNA ligase
gma-u.5	100779584	valine--tRNA ligase
gma-u.5	100790753	uncharacterized LOC100790753
gma-u.5	100817903	uncharacterized LOC100817903
mtr-u.5	11426027	uncharacterized LOC11426027
ppo-u.5	7486559	uncharacterized LOC7486559
ppo-u.5	7467193	uncharacterized LOC7467193
ath-u.5	AT4G24590	RING finger protein
ath-u.5	AT5G49710	RING finger protein
bra-r.6	103862320	uncharacterized LOC103862320
bra-r.6	103861497	uncharacterized LOC103861497
vvi-u.5	100267834	uncharacterized LOC100267834
ghi-r.1	107957813	uncharacterized LOC107957813
ghi-r.1	107957530	uncharacterized LOC107957530
ghi-r.1	107905053	uncharacterized LOC107905053
bna-r.1	BNAA01G13970D	uncharacterized BNAA01G13970D
bna-r.1	125590099	uncharacterized LOC125590099
bna-r.1	BNAC01G16470D	uncharacterized BNAC01G16470D
cit-r.1	102627919	uncharacterized LOC102627919
sly-u.5	101250398	uncharacterized LOC101250398
sot-r.1	102585183	uncharacterized LOC102585183
nta-r.1	107792374	uncharacterized LOC107792374
nta-r.1	107789233	uncharacterized LOC107789233
osa-u.5	4330928	uncharacterized LOC4330928
osa-u.5	4347310	uncharacterized LOC4347310
zma-u.5	109942654	uncharacterized LOC109942654
zma-u.5	103627822	MADS box interactor-like
zma-u.5	103634599	uncharacterized LOC103634599
tae-r.2	123128640	uncharacterized LOC123128640
tae-r.2	123138533	uncharacterized LOC123138533
tae-r.2	123121779	uncharacterized LOC123121779
hvu-r.1	123402700	uncharacterized LOC123402700
hvu-r.1	123398934	uncharacterized LOC123398934
sbi-r.1	8063723	uncharacterized LOC8063723
sbi-r.1	8082691	uncharacterized LOC8082691
bdi-r.1	100827724	uncharacterized LOC100827724
bdi-r.1	100833711	uncharacterized LOC100833711
cre-r.1	CHLRE_06g278271v5	uncharacterized protein

Annotation

functional annotation

KEGG

gmx00520 [list] [network] Amino sugar and nucleotide sugar metabolism (233 genes)

gmx01250 [list] [network] Biosynthesis of nucleotide sugars (182 genes)

GO BP

GO:0042732 [list] [network] D-xylose metabolic process

(17 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(9233 genes)

IEA

GO MF

GO:0048040 [list] [network] UDP-glucuronate decarboxylase activity	(16 genes)	IEA
GO:0070403 [list] [network] NAD+ binding	(30 genes)	IEA

Protein

XP_025980411.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 2, mito 2, nucl 1, plas 1, vacu 1, golg 1, nucl_plas 1, golg_plas 1

(predict for XP_025980411.1)

Subcellular
localization
TargetP

mito 4

(predict for XP_025980411.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-r.7 for 100779584	gma-u.5 for 100779584	gma-u.5 for 100790753	gma-u.5 for 100817903	mtr-u.5 for 11426027	ppo-u.5 for 7486559	ppo-u.5 for 7467193	ath-u.5 for AT4G24590	ath-u.5 for AT5G49710	bra-r.6 for 103862320	bra-r.6 for 103861497	vvi-u.5 for 100267834	ghi-r.1 for 107957813	ghi-r.1 for 107957530	ghi-r.1 for 107905053	bna-r.1 for BNAA01G13970D	bna-r.1 for 125590099	bna-r.1 for BNAC01G16470D	cit-r.1 for 102627919	sly-u.5 for 101250398	sot-r.1 for 102585183	nta-r.1 for 107792374	nta-r.1 for 107789233	osa-u.5 for 4330928	osa-u.5 for 4347310	zma-u.5 for 109942654	zma-u.5 for 103627822	zma-u.5 for 103634599	tae-r.2 for 123128640	tae-r.2 for 123138533	tae-r.2 for 123121779	hvu-r.1 for 123402700	hvu-r.1 for 123398934	sbi-r.1 for 8063723	sbi-r.1 for 8082691	bdi-r.1 for 100827724	bdi-r.1 for 100833711	cre-r.1 for CHLRE_06g278271v5

Ortholog

Ortholog ID: 4271

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

valine--tRNA ligase

uncharacterized LOC100790753

uncharacterized LOC100817903

uncharacterized LOC11426027

uncharacterized LOC7486559

uncharacterized LOC7467193

RING finger protein

uncharacterized LOC103862320

uncharacterized LOC103861497

uncharacterized LOC100267834

uncharacterized LOC107957530

uncharacterized LOC107905053

uncharacterized LOC107900676

uncharacterized LOC125590099

uncharacterized BNAC01G16470D

uncharacterized LOC106440790

uncharacterized LOC102627919

uncharacterized LOC101250398

uncharacterized LOC102585183

uncharacterized LOC107792374

uncharacterized LOC107789233

uncharacterized LOC4330928

uncharacterized LOC4347310

uncharacterized LOC109942654

MADS box interactor-like

uncharacterized LOC103634599

uncharacterized LOC123128640

uncharacterized LOC123104031

uncharacterized LOC123112262

uncharacterized LOC123402700

uncharacterized LOC123398934

uncharacterized LOC8063723

uncharacterized LOC8082691

uncharacterized LOC100827724

uncharacterized LOC100833711

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo04130	SNARE interactions in vesicular transport	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2
ath04145	Phagosome	2
ath04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	2
ath04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	6
ghi03272	Virion - Hepatitis viruses	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	8
ghi03272	Virion - Hepatitis viruses	6
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	6
ghi03272	Virion - Hepatitis viruses	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

100779584

100790753

100817903

11426027

7486559

7467193

828561

835034

103862320

103861497

100267834

107957530

107905053

107900676

125590099

106391305

106440790

102627919

101250398

102585183

107792374

107789233

4330928

4347310

109942654

103627822

103634599

123128640

123104031

123112262

123402700

123398934

8063723

8082691

100827724

100833711

5723603

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100779584 (gma-r.7 coexpression data)

Top 50 enrichment test to 100779584 (gma-r.7 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	2	2	2	1	3	3	1	1	1	2	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100779584 (gma-r.7 coexpression data)

Top 50 enrichment test to 100779584 (gma-r.7 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**