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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-r.7   SPL9C   squamosa promoter-binding-like protein 9c 
 gma-u.5   SPL9C   squamosa promoter-binding-like protein 9c 
 gma-u.5   100802206   squamosa promoter-binding-like protein 8 
 gma-u.5   100805328   squamosa promoter-binding-like protein 13A 
 gma-u.5   100806582   squamosa promoter-binding-like protein 7 
 mtr-u.5   25499846   squamosa promoter-binding-like protein 7 
 mtr-u.5   25502014   squamosa promoter-binding-like protein 13A 
 mtr-u.5   25502503   squamosa promoter-binding protein 1 
 ppo-u.5   7469559   squamosa promoter-binding protein 1 
 ath-u.5   SPL13B   Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein 
 ath-u.5   AT1G69170   Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein 
 ath-u.5   SPL4   squamosa promoter binding protein-like 4 
 bra-r.6   103857275   squamosa promoter-binding-like protein 13A 
 bra-r.6   103844692   squamosa promoter-binding-like protein 8 
 vvi-u.5   100257602   squamosa promoter-binding-like protein 3 
 vvi-u.5   100250271   squamosa promoter-binding protein 1 
 vvi-u.5   100261045   squamosa promoter-binding-like protein 13A 
 ghi-r.1   107921105   squamosa promoter-binding-like protein 13A 
 ghi-r.1   107917040   squamosa promoter-binding protein 1 
 ghi-r.1   107923989   squamosa promoter-binding-like protein 8 
 cit-r.1   102618573   squamosa promoter-binding-like protein 3 
 cit-r.1   102607798   squamosa promoter-binding protein 1-like 
 cit-r.1   102628358   squamosa promoter-binding-like protein 7 
 sly-u.5   SBP3   squamosa promoter binding-like protein 3 
 sly-u.5   101250753   squamosa promoter-binding-like protein 9 
 sly-u.5   SPL-CNR   SQUAMOSA promoter binding protein-like 
 sot-r.1   102594116   squamosa promoter-binding-like protein 3 
 sot-r.1   102591509   squamosa promoter-binding-like protein 8 
 nta-r.1   107762327   squamosa promoter-binding-like protein 4 
 nta-r.1   107817110   squamosa promoter-binding-like protein 9 
 nta-r.1   107817617   squamosa promoter-binding-like protein 9 
 osa-u.5   4345998   squamosa promoter-binding-like protein 14 
 osa-u.5   4346133   squamosa promoter-binding-like protein 16 
 osa-u.5   4337258   squamosa promoter-binding-like protein 8 
 zma-u.5   not1   neighbor of tga1 
 zma-u.5   103656018   squamosa promoter-binding-like protein 11 
 zma-u.5   sbp3   SBP-transcription factor 3 
 tae-r.2   123052590   squamosa promoter-binding-like protein 13 
 hvu-r.1   123399776   squamosa promoter-binding-like protein 18 
 hvu-r.1   123399406   squamosa promoter-binding-like protein 17 
 sbi-r.1   8064852   squamosa promoter-binding-like protein 17 
 sbi-r.1   8080721   squamosa promoter-binding-like protein 13 
 sbi-r.1   8079806   squamosa promoter-binding-like protein 2 
 bdi-r.1   100824643   squamosa promoter-binding-like protein 17 
 bdi-r.1   100823130   squamosa promoter-binding-like protein 7 
 bdi-r.1   100823377   squamosa promoter-binding-like protein 4 
 cre-r.1   CHLRE_06g300600v5   uncharacterized protein 
 cre-r.1   CHLRE_02g104700v5   uncharacterized protein 
 cre-r.1   CHLRE_07g345050v5   uncharacterized protein 

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Top 50 coexpressed genes to SPL9C (gma-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SPL9C (gma-r.7 coexpression data)

CoexMap"100780949"


gmaSPL9C | Entrez gene ID : 100780949      
Species gma mtr ppo ath bra vvi ghi cit sly sot nta osa zma tae hvu sbi bdi cre bna
Paralog 5 3 1 3 2 3 3 3 3 2 3 3 3 1 2 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_003520534.1 [sequence] [blastp]
XP_006576852.1 [sequence] [blastp]
XP_014629260.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_003520534.1)
nucl 10  (predict for XP_006576852.1)
nucl 10  (predict for XP_014629260.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for XP_003520534.1)
chlo 7,  other 4  (predict for XP_006576852.1)
other 6  (predict for XP_014629260.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-r.7
for
SPL9C
gma-u.5
for
SPL9C
gma-u.5
for
100802206
gma-u.5
for
100805328
gma-u.5
for
100806582
mtr-u.5
for
25499846
mtr-u.5
for
25502014
mtr-u.5
for
25502503
ppo-u.5
for
7469559
ath-u.5
for
SPL13B
ath-u.5
for
AT1G69170
ath-u.5
for
SPL4
bra-r.6
for
103857275
bra-r.6
for
103844692
vvi-u.5
for
100257602
vvi-u.5
for
100250271
vvi-u.5
for
100261045
ghi-r.1
for
107921105
ghi-r.1
for
107917040
ghi-r.1
for
107923989
cit-r.1
for
102618573
cit-r.1
for
102607798
cit-r.1
for
102628358
sly-u.5
for
SBP3
sly-u.5
for
101250753
sly-u.5
for
SPL-CNR
sot-r.1
for
102594116
sot-r.1
for
102591509
nta-r.1
for
107762327
nta-r.1
for
107817110
nta-r.1
for
107817617
osa-u.5
for
4345998
osa-u.5
for
4346133
osa-u.5
for
4337258
zma-u.5
for
not1
zma-u.5
for
103656018
zma-u.5
for
sbp3
tae-r.2
for
123052590
hvu-r.1
for
123399776
hvu-r.1
for
123399406
sbi-r.1
for
8064852
sbi-r.1
for
8080721
sbi-r.1
for
8079806
bdi-r.1
for
100824643
bdi-r.1
for
100823130
bdi-r.1
for
100823377
cre-r.1
for
CHLRE_06g300600v5
cre-r.1
for
CHLRE_02g104700v5
cre-r.1
for
CHLRE_07g345050v5


Ortholog ID: 89
Species gma gma mtr mtr ppo ppo ppo ath bra bra vvi vvi ghi ghi ghi bna bna cit cit cit sly sly sly sot sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre cre cre
Symbol LOC100305703 LOC100789055 LOC25502503 LOC11431467 LOC7456784 LOC7454733 LOC18103048 SPL4 LOC103865930 LOC103868453 LOC100257602 LOC100253723 LOC107923989 LOC107924238 LOC107938840 LOC111215130 LOC106370056 LOC102628358 LOC102620002 LOC102616706 LOC101250753 SPL-CNR LOC101266455 LOC102594116 LOC102591509 LOC102581816 LOC107811347 LOC142161672 LOC4346133 LOC4328461 LOC103650833 sbp23 LOC123121932 LOC123167761 LOC123445251 LOC123407106 LOC8064025 LOC8060951 LOC8075819 LOC100824643 LOC100823377 LOC100841788 CHLRE_06g300600v5 CHLRE_02g104700v5 CHLRE_07g345050v5
Function* squamosa promoter-binding-like protein 3 squamosa promoter-binding protein 1-like squamosa promoter-binding protein 1 squamosa promoter-binding-like protein 8 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 13A squamosa promoter-binding-like protein 3 squamosa promoter binding protein-like 4 squamosa promoter-binding-like protein 9 squamosa promoter-binding-like protein 5 squamosa promoter-binding-like protein 3 promoter-binding protein SPL9 squamosa promoter-binding-like protein 8 squamosa promoter-binding-like protein 13A squamosa promoter-binding-like protein 9 squamosa promoter-binding-like protein 9 squamosa promoter-binding-like protein 8 squamosa promoter-binding-like protein 7 teosinte glume architecture 1-like squamosa promoter-binding-like protein 8 squamosa promoter-binding-like protein 9 SQUAMOSA promoter binding protein-like squamosa promoter-binding-like protein 8 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 8 squamosa promoter-binding protein 1-like squamosa promoter-binding protein 1 squamosa promoter-binding-like protein 8 squamosa promoter-binding-like protein 16 squamosa promoter-binding-like protein 4 squamosa promoter-binding-like protein 2 SBP-transcription factor 23 squamosa promoter-binding-like protein 17 squamosa promoter-binding-like protein 16 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 17 squamosa promoter-binding-like protein 14 teosinte glume architecture 1 putative squamosa promoter-binding-like protein 19 squamosa promoter-binding-like protein 17 squamosa promoter-binding-like protein 4 squamosa promoter-binding-like protein 8 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma00904 Diterpenoid biosynthesis 2
gma00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
ppo00592 alpha-Linolenic acid metabolism 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 5
vvi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 5
bna01200 Carbon metabolism 5
bna00073 Cutin, suberine and wax biosynthesis 4
bna00270 Cysteine and methionine metabolism 2
bna00062 Fatty acid elongation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00561 Glycerolipid metabolism 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 3
nta00511 Other glycan degradation 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa00480 Glutathione metabolism 3
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03082 ATP-dependent chromatin remodeling 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100305703 100789055 25502503 11431467 7456784 7454733 18103048 841749 103865930 103868453 100257602 100253723 107923989 107924238 107938840 111215130 106370056 102628358 102620002 102616706 101250753 101256245 101266455 102594116 102591509 102581816 107811347 142161672 4346133 4328461 103650833 100217104 123121932 123167761 123445251 123407106 8064025 8060951 8075819 100824643 100823377 100841788 5716977 5725317 5718132
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