ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-r.7	100798703	uncharacterized LOC100798703
gma-u.5	100798703	uncharacterized LOC100798703
gma-u.5	100819376	uncharacterized LOC100819376
mtr-u.5	25501935	uncharacterized LOC25501935
ppo-u.5	7490224	uncharacterized LOC7490224
ath-u.5	AT5G10110	DNA-directed RNA polymerase subunit beta
ath-u.5	AT5G65120	DNA-directed RNA polymerase subunit beta
bra-r.6	103873938	uncharacterized LOC103873938
bra-r.6	103855851	uncharacterized LOC103855851
bra-r.6	103837564	uncharacterized LOC103837564
vvi-u.5	100853094	uncharacterized LOC100853094
ghi-r.1	107911645	uncharacterized LOC107911645
ghi-r.1	107945529	uncharacterized LOC107945529
ghi-r.1	121211323	uncharacterized LOC121211323
bna-r.1	125596636	uncharacterized LOC125596636
bna-r.1	106383353	uncharacterized LOC106383353
bna-r.1	106430420	uncharacterized LOC106430420
cit-r.1	102613988	uncharacterized LOC102613988
sly-u.5	101264921	uncharacterized LOC101264921
sot-r.1	102591693	uncharacterized LOC102591693
nta-r.1	107785743	uncharacterized LOC107785743
nta-r.1	107783888	uncharacterized LOC107783888
osa-u.5	4330751	uncharacterized LOC4330751
zma-u.5	100276322	uncharacterized LOC100276322
tae-r.2	123128345	uncharacterized LOC123128345
tae-r.2	123138191	uncharacterized LOC123138191
tae-r.2	123145451	uncharacterized LOC123145451
hvu-r.1	123401911	uncharacterized LOC123401911
sbi-r.1	8066413	uncharacterized LOC8066413
bdi-r.1	100826138	uncharacterized LOC100826138

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_006580281.1 [sequence] [blastp]
XP_006580282.1 [sequence] [blastp]
XP_040871507.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto_nucl 4, cyto 1	(predict for XP_006580281.1)
nucl 6, cyto_nucl 4, cyto 1, extr 1, cysk 1, golg_plas 1	(predict for XP_006580282.1)
nucl 7, cyto_nucl 4, cyto 1	(predict for XP_040871507.1)

Subcellular
localization
TargetP

other 6	(predict for XP_006580281.1)
other 6	(predict for XP_006580282.1)
other 6	(predict for XP_040871507.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-r.7 for 100798703	gma-u.5 for 100798703	gma-u.5 for 100819376	mtr-u.5 for 25501935	ppo-u.5 for 7490224	ath-u.5 for AT5G10110	ath-u.5 for AT5G65120	bra-r.6 for 103873938	bra-r.6 for 103855851	bra-r.6 for 103837564	vvi-u.5 for 100853094	ghi-r.1 for 107911645	ghi-r.1 for 107945529	ghi-r.1 for 121211323	bna-r.1 for 125596636	bna-r.1 for 106383353	bna-r.1 for 106430420	cit-r.1 for 102613988	sly-u.5 for 101264921	sot-r.1 for 102591693	nta-r.1 for 107785743	nta-r.1 for 107783888	osa-u.5 for 4330751	zma-u.5 for 100276322	tae-r.2 for 123128345	tae-r.2 for 123138191	tae-r.2 for 123145451	hvu-r.1 for 123401911	sbi-r.1 for 8066413	bdi-r.1 for 100826138

Ortholog

Ortholog ID: 6341

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100798703

uncharacterized LOC100819376

uncharacterized LOC25501935

uncharacterized LOC7490224

DNA-directed RNA polymerase subunit beta

uncharacterized LOC103873938

uncharacterized LOC103855851

uncharacterized LOC103837564

uncharacterized LOC100853094

uncharacterized LOC107945529

uncharacterized LOC121211323

uncharacterized LOC107899699

uncharacterized LOC106415049

uncharacterized LOC102613988

uncharacterized LOC101264921

uncharacterized LOC102591693

uncharacterized LOC107785743

uncharacterized LOC107783888

uncharacterized LOC4330751

uncharacterized LOC100276322

uncharacterized LOC123128345

uncharacterized LOC123138191

uncharacterized LOC123145451

uncharacterized LOC123401911

uncharacterized LOC8066413

uncharacterized LOC100826138

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	3
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03030	DNA replication	8
ppo03410	Base excision repair	2
ppo03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	3
ath03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	5
ath03430	Mismatch repair	4
ath03410	Base excision repair	4
ath03420	Nucleotide excision repair	3
ath03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03030	DNA replication	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03030	DNA replication	5
bra03420	Nucleotide excision repair	2
bra03430	Mismatch repair	2
bra03440	Homologous recombination	2
bra03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03030	DNA replication	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03440	Homologous recombination	4
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04145	Phagosome	4
bna04148	Efferocytosis	4
bna04517	IgSF CAM signaling	4
bna04518	Integrin signaling	4
bna04620	Toll-like receptor signaling pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3
sly03030	DNA replication	2
sly03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03030	DNA replication	5
sot03410	Base excision repair	3
sot03420	Nucleotide excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	3
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	3
tae04148	Efferocytosis	3
tae04517	IgSF CAM signaling	3
tae04518	Integrin signaling	3
tae04620	Toll-like receptor signaling pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03030	DNA replication	7
bdi03420	Nucleotide excision repair	4
bdi03410	Base excision repair	3
bdi03440	Homologous recombination	3
bdi03430	Mismatch repair	2

Expression

Expression pattern

Entrez Gene ID^*

100798703

100819376

25501935

7490224

830875

836636

103873938

103855851

103837564

100853094

107945529

121211323

107899699

106415049

102613988

101264921

102591693

107785743

107783888

4330751

100276322

123128345

123138191

123145451

123401911

8066413

100826138

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100798703 (gma-r.7 coexpression data)

Top 50 enrichment test to 100798703 (gma-r.7 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	1	2	3	1	3	3	1	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100798703 (gma-r.7 coexpression data)

Top 50 enrichment test to 100798703 (gma-r.7 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**