ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-r.7	100799138	laccase-4
gma-u.5	100799138	laccase-4
gma-m.5	100799138	laccase-4
gma-u.5	100785096	laccase-4
gma-u.5	100779825	laccase-4
gma-u.5	100796779	laccase-4
mtr-u.5	11409888	laccase-4
mtr-u.5	25490798	laccase-4
mtr-u.5	11406707	laccase-4
ppo-u.5	7457267	laccase-4
ppo-u.5	7466052	laccase-4
ppo-u.5	7468043	laccase-4
ath-u.5	IRX12	Laccase/Diphenol oxidase family protein
ath-u.5	LAC10	laccase 10
bra-r.6	103850428	laccase-10
bra-r.6	103845315	laccase-16
bra-r.6	103867139	laccase-4
vvi-u.5	100267265	laccase-4
vvi-u.5	100247392	laccase-4
vvi-u.5	100240808	laccase-4
ghi-r.1	107899042	laccase-4
ghi-r.1	107898849	laccase-4
ghi-r.1	107904142	laccase-22
bna-r.1	106354757	laccase-4
bna-r.1	106402805	laccase-4
bna-r.1	106447656	laccase-4-like
cit-r.1	102620940	laccase-4-like
cit-r.1	102614350	laccase-4
cit-r.1	102610433	laccase-4
sly-u.5	101250647	laccase-4-like
sly-u.5	101251829	laccase-4-like
sot-r.1	102583122	laccase-4-like
sot-r.1	102605934	laccase-4
sot-r.1	102588474	laccase-4-like
nta-r.1	107779479	laccase-4-like
nta-r.1	107802428	laccase-22-like
nta-r.1	107803358	laccase-4-like
osa-u.5	9269875	laccase-22-like
hvu-r.1	123448225	laccase-22
bdi-r.1	100837611	laccase-22

Annotation

functional annotation

KEGG

GO BP

GO:0046274 [list] [network] lignin catabolic process

(50 genes)

IEA

GO CC

GO:0048046 [list] [network] apoplast

(133 genes)

IEA

GO MF

GO:0052716 [list] [network] hydroquinone:oxygen oxidoreductase activity	(50 genes)	IEA
GO:0005507 [list] [network] copper ion binding	(135 genes)	IEA

Protein

XP_003518300.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, vacu 3, nucl 1, E.R._vacu 1

(predict for XP_003518300.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_003518300.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-r.7 for 100799138	gma-u.5 for 100799138	gma-m.5 for 100799138	gma-u.5 for 100785096	gma-u.5 for 100779825	gma-u.5 for 100796779	mtr-u.5 for 11409888	mtr-u.5 for 25490798	mtr-u.5 for 11406707	ppo-u.5 for 7457267	ppo-u.5 for 7466052	ppo-u.5 for 7468043	ath-u.5 for IRX12	ath-u.5 for LAC10	bra-r.6 for 103850428	bra-r.6 for 103845315	bra-r.6 for 103867139	vvi-u.5 for 100267265	vvi-u.5 for 100247392	vvi-u.5 for 100240808	ghi-r.1 for 107899042	ghi-r.1 for 107898849	ghi-r.1 for 107904142	bna-r.1 for 106354757	bna-r.1 for 106402805	bna-r.1 for 106447656	cit-r.1 for 102620940	cit-r.1 for 102614350	cit-r.1 for 102610433	sly-u.5 for 101250647	sly-u.5 for 101251829	sot-r.1 for 102583122	sot-r.1 for 102605934	sot-r.1 for 102588474	nta-r.1 for 107779479	nta-r.1 for 107802428	nta-r.1 for 107803358	osa-u.5 for 9269875	hvu-r.1 for 123448225	bdi-r.1 for 100837611

Ortholog

Ortholog ID: 1494

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

hvu

bdi

Symbol

IRX12

LAC10

Function^*

laccase-4

Laccase/Diphenol oxidase family protein

laccase 10

laccase-4

laccase-22

laccase-4

laccase-22

laccase-4-like

laccase-22

laccase-4-like

laccase-4

laccase-4-like

laccase-4

laccase-4-like

laccase-4

laccase-4-like

laccase-22-like

laccase-4

laccase-22-like

laccase-22

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	2
gma04148	Efferocytosis	2
gma04517	IgSF CAM signaling	2
gma04518	Integrin signaling	2
gma04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	2
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00380	Tryptophan metabolism	2
nta04075	Plant hormone signal transduction	2
nta00071	Fatty acid degradation	2
nta00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00380	Tryptophan metabolism	2
hvu00010	Glycolysis / Gluconeogenesis	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00010	Glycolysis / Gluconeogenesis	2
bdi00071	Fatty acid degradation	2
bdi00350	Tyrosine metabolism	2
bdi00620	Pyruvate metabolism	2
bdi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100779825

100797234

100786722

25490798

11406707

11419201

7468043

7478550

7468582

818386

831697

103867139

103870360

103865649

100267265

100247392

100240808

107906601

107960103

106447656

106345514

102620940

102614350

102610433

101250647

101253311

102583122

102605934

102588474

107779479

107802428

107811434

9269875

123448225

100837611

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100799138 (gma-r.7 coexpression data)

Top 50 enrichment test to 100799138 (gma-r.7 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	hvu	bdi	zma	cre	sbi	tae
Paralog	6	3	3	2	3	3	3	3	3	2	3	3	1	1	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100799138 (gma-r.7 coexpression data)

Top 50 enrichment test to 100799138 (gma-r.7 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**