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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-r.7   100799852   vacuolar protein sorting-associated protein 53 A 
 gma-u.5   100799852   vacuolar protein sorting-associated protein 53 A 
 gma-m.5   100799852   vacuolar protein sorting-associated protein 53 A 
 gma-u.5   100791359   vacuolar protein sorting-associated protein 53 A 
 mtr-u.5   11409544   vacuolar protein sorting-associated protein 53 A 
 ppo-u.5   7455871   vacuolar protein sorting-associated protein 53 A 
 ath-u.5   HIT1   Membrane trafficking VPS53 family protein 
 ath-u.5   AT1G50970   Membrane trafficking VPS53 family protein 
 bra-r.6   103868618   vacuolar protein sorting-associated protein 53 A 
 vvi-u.5   100251847   vacuolar protein sorting-associated protein 53 A 
 ghi-r.1   107886392   vacuolar protein sorting-associated protein 53 A 
 ghi-r.1   107920334   vacuolar protein sorting-associated protein 53 A 
 bna-r.1   106415510   vacuolar protein sorting-associated protein 53 A 
 bna-r.1   106451660   vacuolar protein sorting-associated protein 53 A 
 cit-r.1   102630431   vacuolar protein sorting-associated protein 53 A 
 sly-u.5   101256582   vacuolar protein sorting-associated protein 53 A 
 sot-r.1   102584559   vacuolar protein sorting-associated protein 53 A 
 nta-r.1   107794431   vacuolar protein sorting-associated protein 53 A 
 nta-r.1   107760155   vacuolar protein sorting-associated protein 53 A 
 osa-u.5   4324975   vacuolar protein sorting-associated protein 53 A 
 zma-u.5   100501884   uncharacterized LOC100501884 
 tae-r.2   123071647   vacuolar protein sorting-associated protein 53 A 
 tae-r.2   123062804   vacuolar protein sorting-associated protein 53 A 
 tae-r.2   123079982   vacuolar protein sorting-associated protein 53 A 
 hvu-r.1   123445010   vacuolar protein sorting-associated protein 53 A 
 sbi-r.1   8056136   vacuolar protein sorting-associated protein 53 A 
 bdi-r.1   100826427   vacuolar protein sorting-associated protein 53 A 
 cre-r.1   CHLRE_06g259600v5   uncharacterized protein 

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Top 50 coexpressed genes to 100799852 (gma-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100799852 (gma-r.7 coexpression data)

CoexMap"100799852"


gmaLOC100799852 | Entrez gene ID : 100799852      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (34 genes)  IEA  
GO CC
GO:0000938 [list] [network] GARP complex  (8 genes)  IEA  
GO MF
Protein XP_003535023.1 [sequence] [blastp]
XP_006586811.1 [sequence] [blastp]
XP_014617330.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 2,  nucl 1,  E.R._plas 1,  chlo 1,  plas 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_003535023.1)
chlo 4,  mito 2,  E.R. 2,  nucl 1,  plas 1,  vacu 1,  nucl_plas 1  (predict for XP_006586811.1)
E.R. 2,  nucl 1,  E.R._plas 1,  chlo 1,  plas 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_014617330.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_003535023.1)
other 3  (predict for XP_006586811.1)
other 6,  chlo 3  (predict for XP_014617330.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-r.7
for
100799852
gma-u.5
for
100799852
gma-m.5
for
100799852
gma-u.5
for
100791359
mtr-u.5
for
11409544
ppo-u.5
for
7455871
ath-u.5
for
HIT1
ath-u.5
for
AT1G50970
bra-r.6
for
103868618
vvi-u.5
for
100251847
ghi-r.1
for
107886392
ghi-r.1
for
107920334
bna-r.1
for
106415510
bna-r.1
for
106451660
cit-r.1
for
102630431
sly-u.5
for
101256582
sot-r.1
for
102584559
nta-r.1
for
107794431
nta-r.1
for
107760155
osa-u.5
for
4324975
zma-u.5
for
100501884
tae-r.2
for
123071647
tae-r.2
for
123062804
tae-r.2
for
123079982
hvu-r.1
for
123445010
sbi-r.1
for
8056136
bdi-r.1
for
100826427
cre-r.1
for
CHLRE_06g259600v5


Ortholog ID: 9837
Species gma gma mtr ppo ath ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100799852 LOC100791359 LOC11409544 LOC7455871 HIT1 AT1G50970 LOC103868618 LOC100251847 LOC107886392 LOC107920334 LOC106415510 LOC106451660 LOC102630431 LOC101256582 LOC102584559 LOC107794431 LOC107760155 LOC4324975 LOC100501884 LOC123071647 LOC123062804 LOC123079982 LOC123445010 LOC8056136 LOC100826427 CHLRE_06g259600v5
Function* vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A Membrane trafficking VPS53 family protein Membrane trafficking VPS53 family protein vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A uncharacterized LOC100501884 vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 3
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath04142 Lysosome 3
ath00562 Inositol phosphate metabolism 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna03440 Homologous recombination 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna03440 Homologous recombination 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 3
nta00513 Various types of N-glycan biosynthesis 3
nta04141 Protein processing in endoplasmic reticulum 3
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta04144 Endocytosis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma04144 Endocytosis 3
zma04142 Lysosome 2
zma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 8
tae04144 Endocytosis 7
tae05100 Bacterial invasion of epithelial cells 6
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 8
tae04144 Endocytosis 6
tae05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 5
tae04144 Endocytosis 5
tae05100 Bacterial invasion of epithelial cells 4
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 4
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100799852 100791359 11409544 7455871 841472 841519 103868618 100251847 107886392 107920334 106415510 106451660 102630431 101256582 102584559 107794431 107760155 4324975 100501884 123071647 123062804 123079982 123445010 8056136 100826427 5722062
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