ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-r.7	100804540	MADS-box protein FLOWERING LOCUS C
gma-u.5	100804540	MADS-box protein FLOWERING LOCUS C
gma-m.5	100804540	MADS-box protein FLOWERING LOCUS C
gma-u.5	AGL3L	agamous-like MADS-box protein AGL3-like
ppo-u.5	7460555	MADS-box protein EJ2
ppo-u.5	7456243	truncated transcription factor CAULIFLOWER A
ppo-u.5	18097112	MADS-box transcription factor 14
ath-u.5	AGL31	AGAMOUS-like 31
ath-u.5	MAF3	K-box region and MADS-box transcription factor family protein
bra-r.6	103850339	MADS-box protein FLOWERING LOCUS C
bra-r.6	103855272	agamous-like MADS-box protein AGL27
bra-r.6	103855273	protein MADS AFFECTING FLOWERING 5
vvi-u.5	100241171	MADS-box transcription factor 18
vvi-u.5	FLC	flowering locus C
bna-r.1	106382847	agamous-like MADS-box protein AGL27
bna-r.1	106382850	agamous-like MADS-box protein AGL27
cit-r.1	102618544	agamous-like MADS-box protein MADS2
sly-u.5	101250404	agamous-like MADS-box protein AGL27
sly-u.5	101247413	MADS-box transcription factor
sly-u.5	MBP15	MADS-box transcription factor MBP15
sot-r.1	102605812	truncated transcription factor CAULIFLOWER A-like
sot-r.1	102605245	protein MADS AFFECTING FLOWERING 5-like
sot-r.1	102593535	agamous-like MADS-box protein AGL27
nta-r.1	107761984	agamous-like MADS-box protein AGL27
nta-r.1	107830078	agamous-like MADS-box protein AGL27
nta-r.1	107824723	agamous-like MADS-box protein AGL27

Annotation

functional annotation

KEGG

GO BP

GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II

(294 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(5531 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(449 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(557 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(899 genes)	IEA

Protein

XP_003524905.1 [sequence] [blastp]
XP_006580127.1 [sequence] [blastp]
XP_006580128.1 [sequence] [blastp]
XP_006580130.1 [sequence] [blastp]
XP_014631160.1 [sequence] [blastp]
XP_040871462.1 [sequence] [blastp]

Subcellular
localization
wolf

Subcellular
localization
TargetP

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-r.7 for 100804540	gma-u.5 for 100804540	gma-m.5 for 100804540	gma-u.5 for AGL3L	ppo-u.5 for 7460555	ppo-u.5 for 7456243	ppo-u.5 for 18097112	ath-u.5 for AGL31	ath-u.5 for MAF3	bra-r.6 for 103850339	bra-r.6 for 103855272	bra-r.6 for 103855273	vvi-u.5 for 100241171	vvi-u.5 for FLC	bna-r.1 for 106382847	bna-r.1 for 106382850	cit-r.1 for 102618544	sly-u.5 for 101250404	sly-u.5 for 101247413	sly-u.5 for MBP15	sot-r.1 for 102605812	sot-r.1 for 102605245	sot-r.1 for 102593535	nta-r.1 for 107761984	nta-r.1 for 107830078	nta-r.1 for 107824723