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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-r.7   100804665   transcription factor PIF3 
 gma-u.5   100804665   transcription factor PIF3 
 gma-u.5   PIF3   bHLH transcription factor PIF3 
 gma-u.5   100818543   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15 

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Top 50 coexpressed genes to 100804665 (gma-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100804665 (gma-r.7 coexpression data)

CoexMap"100804665"


gmaLOC100804665 | Entrez gene ID : 100804665      
Species gma cre vvi ath ppo mtr hvu bna tae osa zma sly ghi cit sbi bra nta bdi sot
Paralog 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04075 [list] [network] Plant hormone signal transduction (888 genes)
gmx04712 [list] [network] Circadian rhythm - plant (105 genes)
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (3122 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (899 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (2313 genes)  IEA  
Protein XP_003520776.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_003520776.2)
Subcellular
localization
TargetP
other 4  (predict for XP_003520776.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-r.7
for
100804665
gma-u.5
for
100804665
gma-u.5
for
PIF3
gma-u.5
for
100818543


Ortholog ID: 21642
Species gma gma gma
Symbol LOC100804665 PIF3 LOC100818543
Function* transcription factor PIF3 bHLH transcription factor PIF3 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04712 Circadian rhythm - plant 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00350 Tyrosine metabolism 3
gma00360 Phenylalanine metabolism 3
gma00380 Tryptophan metabolism 3
gma00901 Indole alkaloid biosynthesis 3
gma00950 Isoquinoline alkaloid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100804665 100784724 100818543
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