ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-r.7	100808486	uncharacterized LOC100808486
gma-u.5	100808486	uncharacterized LOC100808486
gma-m.5	100808486	uncharacterized LOC100808486
gma-u.5	100791019	uncharacterized LOC100791019
gma-u.5	100812670	uncharacterized LOC100812670
gma-u.5	100818330	uncharacterized LOC100818330
mtr-u.5	25502886	uncharacterized LOC25502886
mtr-u.5	11423208	uncharacterized LOC11423208
mtr-u.5	11442322	uncharacterized LOC11442322
ppo-u.5	7461825	uncharacterized LOC7461825
ath-u.5	AT4G38060	uncharacterized protein
ath-u.5	AT5G65480	uncharacterized protein
bra-r.6	103855772	uncharacterized LOC103855772
bra-r.6	103855305	uncharacterized LOC103855305
vvi-u.5	100855091	uncharacterized LOC100855091
vvi-u.5	100853077	uncharacterized LOC100853077
ghi-r.1	107916811	uncharacterized LOC107916811
ghi-r.1	107914356	uncharacterized LOC107914356
ghi-r.1	107897513	uncharacterized LOC107897513
bna-r.1	125605818	uncharacterized LOC125605818
bna-r.1	125577098	uncharacterized LOC125577098
bna-r.1	106439555	uncharacterized LOC106439555
cit-r.1	102617655	uncharacterized LOC102617655
cit-r.1	102613010	uncharacterized LOC102613010
sly-u.5	101247386	uncharacterized LOC101247386
sly-u.5	101249158	uncharacterized LOC101249158
sly-u.5	101255390	uncharacterized LOC101255390
sot-r.1	102582290	uncharacterized LOC102582290
sot-r.1	102606343	uncharacterized LOC102606343
sot-r.1	102603530	uncharacterized LOC102603530
nta-r.1	107815623	uncharacterized LOC107815623
nta-r.1	107769431	uncharacterized LOC107769431
nta-r.1	107777327	uncharacterized LOC107777327
osa-u.5	4346914	uncharacterized LOC4346914
osa-u.5	4345570	uncharacterized LOC4345570
zma-u.5	100274346	uncharacterized LOC100274346
zma-u.5	103643322	uncharacterized LOC103643322
zma-u.5	100277803	uncharacterized LOC100277803
tae-r.2	123111843	uncharacterized LOC123111843
tae-r.2	123103633	uncharacterized LOC123103633
tae-r.2	123121410	uncharacterized LOC123121410
hvu-r.1	123396814	uncharacterized LOC123396814
sbi-r.1	8073548	uncharacterized LOC8073548
sbi-r.1	110432930	uncharacterized LOC110432930
bdi-r.1	100841052	uncharacterized LOC100841052
bdi-r.1	100845849	uncharacterized LOC100845849

Top 50 coexpressed genes to 100808486 (gma-r.7 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100808486 (gma-r.7 coexpression data)

CoexMap"100808486"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003544831.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, cyto 2, nucl 1, mito 1, extr 1, E.R._vacu 1

(predict for XP_003544831.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_003544831.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-r.7 for 100808486	gma-u.5 for 100808486	gma-m.5 for 100808486	gma-u.5 for 100791019	gma-u.5 for 100812670	gma-u.5 for 100818330	mtr-u.5 for 25502886	mtr-u.5 for 11423208	mtr-u.5 for 11442322	ppo-u.5 for 7461825	ath-u.5 for AT4G38060	ath-u.5 for AT5G65480	bra-r.6 for 103855772	bra-r.6 for 103855305	vvi-u.5 for 100855091	vvi-u.5 for 100853077	ghi-r.1 for 107916811	ghi-r.1 for 107914356	ghi-r.1 for 107897513	bna-r.1 for 125605818	bna-r.1 for 125577098	bna-r.1 for 106439555	cit-r.1 for 102617655	cit-r.1 for 102613010	sly-u.5 for 101247386	sly-u.5 for 101249158	sly-u.5 for 101255390	sot-r.1 for 102582290	sot-r.1 for 102606343	sot-r.1 for 102603530	nta-r.1 for 107815623	nta-r.1 for 107769431	nta-r.1 for 107777327	osa-u.5 for 4346914	osa-u.5 for 4345570	zma-u.5 for 100274346	zma-u.5 for 103643322	zma-u.5 for 100277803	tae-r.2 for 123111843	tae-r.2 for 123103633	tae-r.2 for 123121410	hvu-r.1 for 123396814	sbi-r.1 for 8073548	sbi-r.1 for 110432930	bdi-r.1 for 100841052	bdi-r.1 for 100845849

Ortholog

Ortholog ID: 1993

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100808486

uncharacterized LOC100812670

uncharacterized LOC100818330

uncharacterized LOC25502886

uncharacterized LOC11442322

uncharacterized LOC11416529

uncharacterized LOC7461825

uncharacterized protein

uncharacterized LOC103855772

uncharacterized LOC103837582

uncharacterized LOC100855091

uncharacterized LOC100853077

uncharacterized LOC107916811

uncharacterized LOC107914356

uncharacterized LOC107950477

uncharacterized LOC106439555

uncharacterized LOC106418460

uncharacterized LOC106361382

uncharacterized LOC102617655

uncharacterized LOC102613010

uncharacterized LOC101247386

uncharacterized LOC101249158

uncharacterized LOC101255390

uncharacterized LOC102582290

uncharacterized LOC102606343

uncharacterized LOC102603530

uncharacterized LOC107769431

uncharacterized LOC107777327

uncharacterized LOC107796294

uncharacterized LOC4346914

uncharacterized LOC4345570

uncharacterized LOC100274346

uncharacterized LOC100277803

uncharacterized LOC100277074

uncharacterized LOC123111843

uncharacterized LOC123103633

uncharacterized LOC123121410

uncharacterized LOC123396814

uncharacterized LOC8073548

uncharacterized LOC110432930

uncharacterized LOC100841052

uncharacterized LOC100845849

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	2
gma00650	Butanoate metabolism	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	3
mtr00071	Fatty acid degradation	3
mtr00350	Tyrosine metabolism	3
mtr00592	alpha-Linolenic acid metabolism	3
mtr00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bna00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bna00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	5
sot04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	4
nta01230	Biosynthesis of amino acids	4
nta00010	Glycolysis / Gluconeogenesis	2
nta00030	Pentose phosphate pathway	2
nta00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2
zma00010	Glycolysis / Gluconeogenesis	2
zma00030	Pentose phosphate pathway	2
zma00051	Fructose and mannose metabolism	2
zma00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	3
zma03008	Ribosome biogenesis in eukaryotes	2
zma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

100808486

100812670

100818330

25502886

11442322

11416529

7461825

829962

836673

103855772

103837582

100855091

100853077

107916811

107914356

107950477

106439555

106418460

106361382

102617655

102613010

101247386

101249158

101255390

102582290

102606343

102603530

107769431

107777327

107796294

4346914

4345570

100274346

100277803

100277074

123111843

123103633

123121410

123396814

8073548

110432930

100841052

100845849

The preparation time of this page was 0.4 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	1	2	2	2	3	3	2	3	3	3	2	3	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100808486 (gma-r.7 coexpression data)

Top 50 enrichment test to 100808486 (gma-r.7 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**