ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100779201	leucine-rich repeat extensin-like protein 3
gma-r.7	100779201	leucine-rich repeat extensin-like protein 3
gma-m.5	100779201	leucine-rich repeat extensin-like protein 3
gma-u.5	100798711	vegetative cell wall protein gp1
mtr-u.5	25487716	uncharacterized LOC25487716
ppo-u.5	18104535	uncharacterized LOC18104535
ppo-u.5	18104166	uncharacterized LOC18104166
ath-u.5	AT3G54680	proteophosphoglycan-like protein
bra-r.6	103841372	alpha carbonic anhydrase 8
bra-r.6	103829988	uncharacterized LOC103829988
vvi-u.5	100262549	uncharacterized LOC100262549
ghi-r.1	107896956	uncharacterized LOC107896956
ghi-r.1	107909501	uncharacterized LOC107909501
bna-r.1	106352873	uncharacterized LOC106352873
bna-r.1	106411676	serine/arginine repetitive matrix protein 1-like
bna-r.1	106412015	protein IQ-DOMAIN 14
cit-r.1	102621624	uncharacterized LOC102621624
sly-u.5	543591	uncharacterized LOC543591
sot-r.1	102590314	uncharacterized LOC102590314
nta-r.1	107784039	uncharacterized LOC107784039
nta-r.1	107790001	uncharacterized LOC107790001

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_006592857.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, chlo 2

(predict for XP_006592857.1)

Subcellular
localization
TargetP

scret 7

(predict for XP_006592857.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100779201	gma-r.7 for 100779201	gma-m.5 for 100779201	gma-u.5 for 100798711	mtr-u.5 for 25487716	ppo-u.5 for 18104535	ppo-u.5 for 18104166	ath-u.5 for AT3G54680	bra-r.6 for 103841372	bra-r.6 for 103829988	vvi-u.5 for 100262549	ghi-r.1 for 107896956	ghi-r.1 for 107909501	bna-r.1 for 106352873	bna-r.1 for 106411676	bna-r.1 for 106412015	cit-r.1 for 102621624	sly-u.5 for 543591	sot-r.1 for 102590314	nta-r.1 for 107784039	nta-r.1 for 107790001

Ortholog

Ortholog ID: 12207

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

Symbol

Function^*

leucine-rich repeat extensin-like protein 3

vegetative cell wall protein gp1

uncharacterized LOC25487716

uncharacterized LOC18104535

uncharacterized LOC18104166

proteophosphoglycan-like protein

alpha carbonic anhydrase 8

uncharacterized LOC103829988

uncharacterized LOC100262549

uncharacterized LOC107896956

uncharacterized LOC107909501

uncharacterized LOC106352873

serine/arginine repetitive matrix protein 1-like

uncharacterized BNAC06G15360D

uncharacterized LOC102621624

uncharacterized LOC543591

uncharacterized LOC102590314

uncharacterized LOC107784039

uncharacterized LOC107790001

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00240	Pyrimidine metabolism	2
mtr00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2
ppo00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ppo00350	Tyrosine metabolism	2
ppo00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	5
ath04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00061	Fatty acid biosynthesis	4
ghi01040	Biosynthesis of unsaturated fatty acids	4
ghi01212	Fatty acid metabolism	4
ghi04141	Protein processing in endoplasmic reticulum	2
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00061	Fatty acid biosynthesis	4
ghi01040	Biosynthesis of unsaturated fatty acids	4
ghi01212	Fatty acid metabolism	4
ghi04141	Protein processing in endoplasmic reticulum	3
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	7
cit01200	Carbon metabolism	6
cit01230	Biosynthesis of amino acids	6
cit00710	Carbon fixation by Calvin cycle	5
cit00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	3
nta00280	Valine, leucine and isoleucine degradation	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	3
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta00280	Valine, leucine and isoleucine degradation	2
nta00650	Butanoate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100779201

100798711

25487716

18104535

18104166

824633

103841372

103829988

100262549

107896956

107909501

106352873

106411676

106407375

102621624

543591

102590314

107784039

107790001

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100779201 (gma-u.5 coexpression data)

Top 50 enrichment test to 100779201 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	sbi	osa	tae	hvu	zma	cre	bdi
Paralog	4	1	2	1	2	1	2	3	1	1	1	2	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100779201 (gma-u.5 coexpression data)

Top 50 enrichment test to 100779201 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**