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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100783800   KRR1 small subunit processome component homolog 
 gma-r.7   100783800   KRR1 small subunit processome component homolog 
 gma-u.5   100816856   ribosomal RNA assembly protein mis3-like 
 mtr-u.5   11435195   KRR1 small subunit processome component homolog 
 ppo-u.5   7462572   KRR1 small subunit processome component 
 ath-u.5   AT5G08420   RNA-binding KH domain-containing protein 
 vvi-u.5   100245609   KRR1 small subunit processome component homolog 
 sly-u.5   101259018   KRR1 small subunit processome component 
 osa-u.5   4348775   KRR1 small subunit processome component homolog 
 zma-u.5   107521945   RNA-binding KH domain-containing protein 

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Top 50 coexpressed genes to 100783800 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100783800 (gma-u.5 coexpression data)

CoexMap"100783800"


gmaLOC100783800 | Entrez gene ID : 100783800      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0032040 [list] [network] small-subunit processome  (81 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (353 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_003519473.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 4,  cysk 1  (predict for XP_003519473.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003519473.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100783800

.
gma-r.7
for
100783800

.
gma-u.5
for
100816856

.
mtr-u.5
for
11435195

.
ppo-u.5
for
7462572

.
ath-u.5
for
AT5G08420

.
vvi-u.5
for
100245609

.
sly-u.5
for
101259018

.
osa-u.5
for
4348775

.
zma-u.5
for
107521945

.


Ortholog ID: 7706
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G08420 LOC100783800 LOC100816856 LOC101259018 LOC4348775 LOC107521945 LOC103850699 LOC103847151 LOC100245609 LOC7462572 LOC11435195 LOC123070363 LOC123078815 LOC123444261 LOC107910627 LOC107951097 LOC106419335 LOC106396313 CHLRE_12g508200v5 LOC8059178 LOC102598523 LOC102616017 LOC100845494 LOC107791487 LOC107779317
Function* RNA-binding KH domain-containing protein KRR1 small subunit processome component homolog ribosomal RNA assembly protein mis3-like KRR1 small subunit processome component KRR1 small subunit processome component homolog RNA-binding KH domain-containing protein KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog uncharacterized protein KRR1 small subunit processome component KRR1 small subunit processome component KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component KRR1 small subunit processome component-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00450 Selenocompound metabolism 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra04141 Protein processing in endoplasmic reticulum 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830741 100783800 100816856 101259018 4348775 107521945 103850699 103847151 100245609 7462572 11435195 123070363 123078815 123444261 107910627 107951097 106419335 106396313 5716516 8059178 102598523 102616017 100845494 107791487 107779317
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