ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100786384	uncharacterized LOC100786384
gma-r.7	100786384	uncharacterized LOC100786384
gma-u.5	100789443	uncharacterized LOC100789443
mtr-u.5	25486959	putative uncharacterized protein DDB_G0286901
ppo-u.5	7486858	uncharacterized LOC7486858
ppo-u.5	7469503	uncharacterized LOC7469503
ath-u.5	NUFIP	GATA zinc finger protein
bra-r.6	103845836	transcription factor mef2A
vvi-u.5	100252331	uncharacterized LOC100252331
ghi-r.1	107955361	homeobox protein 4
ghi-r.1	107923434	uncharacterized LOC107923434
bna-r.1	106416609	transcription factor mef2A
bna-r.1	106387788	transcription factor mef2A
cit-r.1	102622087	uncharacterized LOC102622087
sly-u.5	101251819	uncharacterized LOC101251819
sot-r.1	102599911	uncharacterized LOC102599911
nta-r.1	107817723	uncharacterized LOC107817723
nta-r.1	107797885	uncharacterized LOC107797885
zma-u.5	100217067	uncharacterized LOC100217067
tae-r.2	123071170	uncharacterized LOC123071170
sbi-r.1	8055285	uncharacterized LOC8055285

Annotation

functional annotation

KEGG

gmx03015 [list] [network] mRNA surveillance pathway (214 genes)

GO BP

GO:0000492 [list] [network] box C/D snoRNP assembly

(12 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(5531 genes)

IEA

GO MF

Protein

XP_006595975.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_006595975.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_006595975.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100786384	gma-r.7 for 100786384	gma-u.5 for 100789443	mtr-u.5 for 25486959	ppo-u.5 for 7486858	ppo-u.5 for 7469503	ath-u.5 for NUFIP	bra-r.6 for 103845836	vvi-u.5 for 100252331	ghi-r.1 for 107955361	ghi-r.1 for 107923434	bna-r.1 for 106416609	bna-r.1 for 106387788	cit-r.1 for 102622087	sly-u.5 for 101251819	sot-r.1 for 102599911	nta-r.1 for 107817723	nta-r.1 for 107797885	zma-u.5 for 100217067	tae-r.2 for 123071170	sbi-r.1 for 8055285

Ortholog

Ortholog ID: 10312

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

zma

tae

sbi

Symbol

NUFIP

Function^*

uncharacterized LOC100786384

uncharacterized LOC100789443

putative uncharacterized protein DDB_G0286901

uncharacterized LOC7486858

uncharacterized LOC7469503

GATA zinc finger protein

transcription factor mef2A

uncharacterized LOC100252331

homeobox protein 4

uncharacterized LOC107923434

transcription factor mef2A

uncharacterized LOC102622087

uncharacterized LOC101251819

uncharacterized LOC102599911

uncharacterized LOC107817723

uncharacterized LOC107797885

uncharacterized LOC100217067

uncharacterized LOC123071170

uncharacterized LOC8055285

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	5
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	5
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	6
sly03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta03008	Ribosome biogenesis in eukaryotes	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	11
tae03020	RNA polymerase	5

Expression

Expression pattern

Entrez Gene ID^*

100786384

100789443

25486959

7486858

7469503

831962

103845836

100252331

107955361

107923434

106416609

106387788

102622087

101251819

102599911

107817723

107797885

100217067

123071170

8055285

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100786384 (gma-u.5 coexpression data)

Top 50 enrichment test to 100786384 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	zma	tae	sbi	cre	osa	bdi	hvu
Paralog	3	1	2	1	1	1	2	2	1	1	1	2	1	1	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100786384 (gma-u.5 coexpression data)

Top 50 enrichment test to 100786384 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**