ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100788977	uncharacterized LOC100788977
gma-r.7	100788977	uncharacterized LOC100788977
gma-m.5	100788977	uncharacterized LOC100788977
gma-u.5	100798336	tetraspanin-3
gma-u.5	100820399	tetraspanin-3
mtr-u.5	11406473	tetraspanin-3
ppo-u.5	7489332	tetraspanin-3
ath-u.5	TET3	tetraspanin3
bra-r.6	103873534	tetraspanin-3
vvi-u.5	100260311	tetraspanin-3
ghi-r.1	107889246	tetraspanin-3
ghi-r.1	107891497	tetraspanin-3
ghi-r.1	107959259	tetraspanin-3
bna-r.1	106406169	tetraspanin-3
bna-r.1	106376978	tetraspanin-3
cit-r.1	102625667	tetraspanin-3-like
sly-u.5	101249329	tetraspanin-3
sly-u.5	101259942	tetraspanin-3
sot-r.1	102600470	tetraspanin-3-like
sot-r.1	102603490	tetraspanin-3-like
nta-r.1	107777710	tetraspanin-3-like
nta-r.1	107785629	tetraspanin-3-like
nta-r.1	107811372	tetraspanin-3
osa-u.5	4337662	tetraspanin-3
zma-u.5	100282127	senescence-associated protein
zma-u.5	100282601	uncharacterized LOC100282601
tae-r.2	123188887	tetraspanin-3
tae-r.2	123180196	tetraspanin-3
tae-r.2	123107703	tetraspanin-3
hvu-r.1	123405678	tetraspanin-3
sbi-r.1	8071250	tetraspanin-3
bdi-r.1	100831242	tetraspanin-3
bdi-r.1	100828173	tetraspanin-4

Annotation

functional annotation

KEGG

GO BP

GO:0009734 [list] [network] auxin-activated signaling pathway

(44 genes)

IEA

GO CC

GO:0009506 [list] [network] plasmodesma	(260 genes)	IEA
GO:0005886 [list] [network] plasma membrane	(1870 genes)	IEA

GO MF

Protein

NP_001241564.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, extr 2, golg 2, E.R._plas 2

(predict for NP_001241564.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_001241564.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100788977	gma-r.7 for 100788977	gma-m.5 for 100788977	gma-u.5 for 100798336	gma-u.5 for 100820399	mtr-u.5 for 11406473	ppo-u.5 for 7489332	ath-u.5 for TET3	bra-r.6 for 103873534	vvi-u.5 for 100260311	ghi-r.1 for 107889246	ghi-r.1 for 107891497	ghi-r.1 for 107959259	bna-r.1 for 106406169	bna-r.1 for 106376978	cit-r.1 for 102625667	sly-u.5 for 101249329	sly-u.5 for 101259942	sot-r.1 for 102600470	sot-r.1 for 102603490	nta-r.1 for 107777710	nta-r.1 for 107785629	nta-r.1 for 107811372	osa-u.5 for 4337662	zma-u.5 for 100282127	zma-u.5 for 100282601	tae-r.2 for 123188887	tae-r.2 for 123180196	tae-r.2 for 123107703	hvu-r.1 for 123405678	sbi-r.1 for 8071250	bdi-r.1 for 100831242	bdi-r.1 for 100828173

Ortholog

Ortholog ID: 5530

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

TET3

Function^*

uncharacterized LOC100788977

tetraspanin-3

tetraspanin3

tetraspanin-3

tetraspanin-3-like

tetraspanin-3

tetraspanin-3-like

tetraspanin-3

senescence-associated protein

uncharacterized LOC100282601

tetraspanin-3

tetraspanin-4

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04075	Plant hormone signal transduction	3
bra04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	4
sly04142	Lysosome	4
sly04145	Phagosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03272	Virion - Hepatitis viruses	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2
nta04144	Endocytosis	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00910	Nitrogen metabolism	3
bdi01310	Nitrogen cycle	3

Expression

Expression pattern

Entrez Gene ID^*

100788977

100798336

100820399

11406473

7489332

823702

103873534

100260311

107889246

107891497

107959259

106406169

106376978

102625667

101249329

101259942

102600470

102603490

107785629

107811372

107790949

4337662

100282127

100282601

123188887

123180196

123107703

123405678

8071250

100831242

100828173

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100788977 (gma-u.5 coexpression data)

Top 50 enrichment test to 100788977 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	1	1	1	1	1	3	2	1	2	2	3	1	2	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100788977 (gma-u.5 coexpression data)

Top 50 enrichment test to 100788977 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**