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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100789328   DExH-box ATP-dependent RNA helicase DExH16, mitochondrial 
 gma-r.7   100789328   DExH-box ATP-dependent RNA helicase DExH16, mitochondrial 
 gma-m.5   100789328   DExH-box ATP-dependent RNA helicase DExH16, mitochondrial 
 gma-u.5   100807810   DExH-box ATP-dependent RNA helicase DExH16, mitochondrial 
 mtr-u.5   11438666   DExH-box ATP-dependent RNA helicase DExH16, mitochondrial 
 ppo-u.5   7474187   DExH-box ATP-dependent RNA helicase DExH16, mitochondrial 
 ath-u.5   ATSUV3   ATP-dependent RNA helicase 
 vvi-u.5   100264771   ATP-dependent RNA helicase SUV3, mitochondrial 
 sly-u.5   101250735   ATP-dependent RNA helicase SUV3, mitochondrial 
 osa-u.5   4334089   ATP-dependent RNA helicase SUV3, mitochondrial-like 
 zma-u.5   100273495   ATP-dependent RNA helicase SUV3, mitochondrial 

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Top 50 coexpressed genes to 100789328 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100789328 (gma-u.5 coexpression data)

CoexMap"100789328"


gmaLOC100789328 | Entrez gene ID : 100789328      
Species gma mtr ppo ath vvi sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000965 [list] [network] mitochondrial RNA 3'-end processing  (11 genes)  IEA  
GO:0006401 [list] [network] RNA catabolic process  (149 genes)  IEA  
GO CC
GO:0045025 [list] [network] mitochondrial degradosome  (4 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (107 genes)  IEA  
GO:0016817 [list] [network] hydrolase activity, acting on acid anhydrides  (1244 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein XP_003537614.1 [sequence] [blastp]
XP_014619214.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_003537614.1)
chlo 9  (predict for XP_014619214.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_003537614.1)
mito 9  (predict for XP_014619214.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100789328

.
gma-r.7
for
100789328

.
gma-m.5
for
100789328

.
gma-u.5
for
100807810

.
mtr-u.5
for
11438666

.
ppo-u.5
for
7474187

.
ath-u.5
for
ATSUV3

.
vvi-u.5
for
100264771

.
sly-u.5
for
101250735

.
osa-u.5
for
4334089

.
zma-u.5
for
100273495

.


Ortholog ID: 10186
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol ATSUV3 LOC100789328 LOC100807810 LOC101250735 LOC4334089 LOC100273495 LOC103871628 LOC100264771 LOC7474187 LOC11438666 LOC123113295 LOC123122802 LOC123452197 LOC107928427 LOC107928980 LOC106372726 LOC106369203 CHLRE_06g270900v5 LOC8060479 LOC102597912 LOC102617432 LOC100829138 LOC107806737 LOC107759763
Function* ATP-dependent RNA helicase DExH-box ATP-dependent RNA helicase DExH16, mitochondrial DExH-box ATP-dependent RNA helicase DExH16, mitochondrial ATP-dependent RNA helicase SUV3, mitochondrial ATP-dependent RNA helicase SUV3, mitochondrial-like ATP-dependent RNA helicase SUV3, mitochondrial DExH-box ATP-dependent RNA helicase DExH16, mitochondrial ATP-dependent RNA helicase SUV3, mitochondrial DExH-box ATP-dependent RNA helicase DExH16, mitochondrial DExH-box ATP-dependent RNA helicase DExH16, mitochondrial ATP-dependent RNA helicase SUV3, mitochondrial ATP-dependent RNA helicase SUV3, mitochondrial ATP-dependent RNA helicase SUV3, mitochondrial DExH-box ATP-dependent RNA helicase DExH16, mitochondrial DExH-box ATP-dependent RNA helicase DExH16, mitochondrial DExH-box ATP-dependent RNA helicase DExH16, mitochondrial DExH-box ATP-dependent RNA helicase DExH16, mitochondrial uncharacterized protein ATP-dependent RNA helicase SUV3, mitochondrial ATP-dependent RNA helicase SUV3, mitochondrial DExH-box ATP-dependent RNA helicase DExH16, mitochondrial ATP-dependent RNA helicase SUV3, mitochondrial ATP-dependent RNA helicase SUV3, mitochondrial ATP-dependent RNA helicase SUV3, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 4
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04145 Phagosome 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03020 RNA polymerase 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 4
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04120 Ubiquitin mediated proteolysis 6
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04120 Ubiquitin mediated proteolysis 6
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03008 Ribosome biogenesis in eukaryotes 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827134 100789328 100807810 101250735 4334089 100273495 103871628 100264771 7474187 11438666 123113295 123122802 123452197 107928427 107928980 106372726 106369203 66053650 8060479 102597912 102617432 100829138 107806737 107759763
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