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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100797008   pentatricopeptide repeat-containing protein At2g13600 
 gma-r.7   100797008   pentatricopeptide repeat-containing protein At2g13600 
 gma-u.5   100789457   pentatricopeptide repeat-containing protein At2g13600 
 gma-u.5   100795787   pentatricopeptide repeat-containing protein At2g13600 
 vvi-u.5   100249582   pentatricopeptide repeat-containing protein At2g13600 
 osa-u.5   4336784   putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 
 zma-u.5   100304218   Pentatricopeptide repeat-containing protein 
 tae-r.2   123054549   pentatricopeptide repeat-containing protein At3g26782, mitochondrial 
 tae-r.2   123190406   pentatricopeptide repeat-containing protein At3g26782, mitochondrial 
 sbi-r.1   8060444   putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 
 bdi-r.1   100844740   putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 

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Top 50 coexpressed genes to 100797008 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100797008 (gma-u.5 coexpression data)

CoexMap"100797008"


gmaLOC100797008 | Entrez gene ID : 100797008    
Species gma vvi osa zma tae sbi bdi cit sly sot mtr bra ath bna hvu ppo ghi cre nta
Paralog 4 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042791 [list] [network] 5S class rRNA transcription by RNA polymerase III  (6 genes)  IEA  
GO:0006384 [list] [network] transcription initiation at RNA polymerase III promoter  (21 genes)  IEA  
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (13 genes)  IEA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003550224.2 [sequence] [blastp]
XP_006601200.1 [sequence] [blastp]
XP_006601201.1 [sequence] [blastp]
XP_006601202.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  chlo_mito 2,  cyto 1,  plas 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_003550224.2)
chlo 4,  nucl 3,  cysk 1,  nucl_plas 1  (predict for XP_006601200.1)
chlo 4,  nucl 3,  cysk 1,  nucl_plas 1  (predict for XP_006601201.1)
chlo 4,  nucl 2,  chlo_mito 2,  cyto 1,  plas 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_006601202.1)
Subcellular
localization
TargetP
other 4,  scret 3  (predict for XP_003550224.2)
other 4  (predict for XP_006601200.1)
other 4  (predict for XP_006601201.1)
other 4,  scret 3  (predict for XP_006601202.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100797008
gma-r.7
for
100797008
gma-u.5
for
100789457
gma-u.5
for
100795787
vvi-u.5
for
100249582
osa-u.5
for
4336784
zma-u.5
for
100304218
tae-r.2
for
123054549
tae-r.2
for
123190406
sbi-r.1
for
8060444
bdi-r.1
for
100844740


Ortholog ID: 14487
Species gma gma gma vvi osa zma tae tae sbi bdi
Symbol LOC100797008 LOC100789457 LOC100795787 LOC100249582 LOC4336784 LOC100304218 LOC123054549 LOC123190406 LOC8060444 LOC100844740
Function* pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100797008 100789457 100795787 100249582 4336784 100304218 123054549 123190406 8060444 100844740
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