ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100799019	uncharacterized LOC100799019
gma-r.7	100799019	uncharacterized LOC100799019
gma-u.5	100812461	uncharacterized LOC100812461
gma-u.5	100795569	uncharacterized LOC100795569
gma-u.5	100779006	uncharacterized LOC100779006
mtr-u.5	25495080	uncharacterized LOC25495080
mtr-u.5	11407748	uncharacterized LOC11407748
ppo-u.5	7462026	uncharacterized LOC7462026
ppo-u.5	7455508	uncharacterized LOC7455508
ath-u.5	AT4G29400	oxidoreductase/transition metal ion-binding protein (DUF3531)
ath-u.5	AT5G08400	structural maintenance of chromosomes-like protein, putative (DUF3531)
bra-r.6	103853607	uncharacterized LOC103853607
bra-r.6	103855782	uncharacterized LOC103855782
bra-r.6	103850697	uncharacterized LOC103850697
vvi-u.5	100262808	uncharacterized LOC100262808
vvi-u.5	100257820	uncharacterized LOC100257820
ghi-r.1	107940196	uncharacterized LOC107940196
ghi-r.1	107932817	uncharacterized LOC107932817
ghi-r.1	107908995	uncharacterized LOC107908995
bna-r.1	125581608	uncharacterized LOC125581608
bna-r.1	125593100	uncharacterized LOC125593100
bna-r.1	BNAC01G09090D	uncharacterized BNAC01G09090D
cit-r.1	102614441	hypothetical protein
cit-r.1	102611141	uncharacterized LOC102611141
sly-u.5	101257884	uncharacterized LOC101257884
sly-u.5	101254246	uncharacterized LOC101254246
sot-r.1	102598694	uncharacterized LOC102598694
sot-r.1	102588626	uncharacterized LOC102588626
nta-r.1	142166980	uncharacterized LOC142166980
nta-r.1	142166979	uncharacterized LOC142166979
nta-r.1	142173008	uncharacterized LOC142173008
osa-u.5	4331225	uncharacterized LOC4331225
osa-u.5	4324676	uncharacterized LOC4324676
zma-u.5	100273361	uncharacterized LOC100273361
zma-u.5	100274170	Ribonuclease P protein component 3
tae-r.2	123061296	uncharacterized LOC123061296
tae-r.2	123078386	uncharacterized LOC123078386
tae-r.2	123128854	uncharacterized LOC123128854
hvu-r.1	123403409	uncharacterized LOC123403409
hvu-r.1	123443699	uncharacterized LOC123443699
sbi-r.1	8059097	uncharacterized LOC8059097
sbi-r.1	8084450	uncharacterized LOC8084450
bdi-r.1	100826973	uncharacterized LOC100826973
bdi-r.1	100834613	uncharacterized LOC100834613
cre-r.1	CHLRE_06g252350v5	uncharacterized protein

Top 50 coexpressed genes to 100799019 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100799019 (gma-u.5 coexpression data)

CoexMap"100799019"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001242037.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for NP_001242037.2)

Subcellular
localization
TargetP

chlo 5, mito 3

(predict for NP_001242037.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100799019	gma-r.7 for 100799019	gma-u.5 for 100812461	gma-u.5 for 100795569	gma-u.5 for 100779006	mtr-u.5 for 25495080	mtr-u.5 for 11407748	ppo-u.5 for 7462026	ppo-u.5 for 7455508	ath-u.5 for AT4G29400	ath-u.5 for AT5G08400	bra-r.6 for 103853607	bra-r.6 for 103855782	bra-r.6 for 103850697	vvi-u.5 for 100262808	vvi-u.5 for 100257820	ghi-r.1 for 107940196	ghi-r.1 for 107932817	ghi-r.1 for 107908995	bna-r.1 for 125581608	bna-r.1 for 125593100	bna-r.1 for BNAC01G09090D	cit-r.1 for 102614441	cit-r.1 for 102611141	sly-u.5 for 101257884	sly-u.5 for 101254246	sot-r.1 for 102598694	sot-r.1 for 102588626	nta-r.1 for 142166980	nta-r.1 for 142166979	nta-r.1 for 142173008	osa-u.5 for 4331225	osa-u.5 for 4324676	zma-u.5 for 100273361	zma-u.5 for 100274170	tae-r.2 for 123061296	tae-r.2 for 123078386	tae-r.2 for 123128854	hvu-r.1 for 123403409	hvu-r.1 for 123443699	sbi-r.1 for 8059097	sbi-r.1 for 8084450	bdi-r.1 for 100826973	bdi-r.1 for 100834613	cre-r.1 for CHLRE_06g252350v5

Ortholog

Ortholog ID: 2834

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100799019

uncharacterized LOC100812461

uncharacterized LOC100795569

uncharacterized LOC25495080

uncharacterized LOC11407748

uncharacterized LOC7462026

uncharacterized LOC7455508

oxidoreductase/transition metal ion-binding protein (DUF3531)

structural maintenance of chromosomes-like protein, putative (DUF3531)

uncharacterized LOC103853607

uncharacterized LOC103855782

uncharacterized LOC103850697

uncharacterized LOC100262808

uncharacterized LOC100257820

uncharacterized LOC107940196

uncharacterized LOC107908995

uncharacterized LOC107886929

uncharacterized LOC125581608

uncharacterized LOC125593100

uncharacterized LOC106386202

hypothetical protein

uncharacterized LOC102611141

uncharacterized LOC101257884

uncharacterized LOC101254246

uncharacterized LOC102598694

uncharacterized LOC102588626

uncharacterized LOC142173008

uncharacterized LOC107794067

uncharacterized LOC142173009

uncharacterized LOC4331225

uncharacterized LOC4324676

uncharacterized LOC100273361

Ribonuclease P protein component 3

uncharacterized LOC123128854

uncharacterized LOC123139335

uncharacterized LOC123145999

uncharacterized LOC123403409

uncharacterized LOC123443699

uncharacterized LOC8059097

uncharacterized LOC8084450

uncharacterized LOC100826973

uncharacterized LOC100834613

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	3
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01240	Biosynthesis of cofactors	3
mtr00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2
ppo00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00030	Pentose phosphate pathway	2
ghi00230	Purine metabolism	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00785	Lipoic acid metabolism	3
bna01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00785	Lipoic acid metabolism	3
bna01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	3
bna04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5
cit01230	Biosynthesis of amino acids	3
cit00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00860	Porphyrin metabolism	4
tae01240	Biosynthesis of cofactors	4
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00860	Porphyrin metabolism	3
hvu01240	Biosynthesis of cofactors	2
hvu03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01230	Biosynthesis of amino acids	3
cre01240	Biosynthesis of cofactors	2
cre00340	Histidine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100799019

100812461

100795569

25495080

11407748

7462026

7455508

829061

830738

103853607

103855782

103850697

100262808

100257820

107940196

107908995

107886929

125581608

125593100

106386202

102614441

102611141

101257884

101254246

102598694

102588626

142173008

107794067

142173009

4331225

4324676

100273361

100274170

123128854

123139335

123145999

123403409

123443699

8059097

8084450

100826973

100834613

5722174

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Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	2	2	3	2	3	3	2	2	2	3	2	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100799019 (gma-u.5 coexpression data)

Top 50 enrichment test to 100799019 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**