ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100804824	WW domain-binding protein 11
gma-r.7	100804824	WW domain-binding protein 11
gma-u.5	100811539	uncharacterized LOC100811539
gma-u.5	100799093	verprolin
gma-u.5	100814577	protein CASC3
mtr-u.5	11425770	WASP homolog-associated protein with actin, membranes and microtubules
mtr-u.5	25486437	formin-like protein 7
mtr-u.5	11418916	uncharacterized LOC11418916
ppo-u.5	7484648	formin-like protein 14
ppo-u.5	18094844	uncharacterized LOC18094844
ath-u.5	AT5G57070	hydroxyproline-rich glycoprotein family protein
ath-u.5	AT1G72790	hydroxyproline-rich glycoprotein family protein
bra-r.6	103845144	pollen-specific leucine-rich repeat extensin-like protein 2
bra-r.6	103831783	uncharacterized LOC103831783
bra-r.6	103830779	proline-rich protein 12
vvi-u.5	104880208	formin-like protein 7
vvi-u.5	100261010	formin-like protein 13
ghi-r.1	107907120	formin-like protein 5
ghi-r.1	107916402	serine/arginine repetitive matrix protein 1-like
ghi-r.1	107931562	actin cytoskeleton-regulatory complex protein PAN1
bna-r.1	111200297	COPII coat assembly protein SEC16
bna-r.1	106354241	formin-like protein 20
bna-r.1	106377544	formin-like protein 3
cit-r.1	102615352	pollen-specific leucine-rich repeat extensin-like protein 1
sly-u.5	104646528	uncharacterized LOC104646528
sly-u.5	101260449	pollen-specific leucine-rich repeat extensin-like protein 1
sot-r.1	107059788	pollen-specific leucine-rich repeat extensin-like protein 1
sot-r.1	107060823	pollen-specific leucine-rich repeat extensin-like protein 1
sot-r.1	102595173	formin-like protein 20
nta-r.1	107771468	uncharacterized LOC107771468
nta-r.1	107804792	uncharacterized LOC107804792
nta-r.1	107808231	uncharacterized LOC107808231
osa-u.5	4324204	formin-like protein 7
zma-u.5	111589982	serine/arginine repetitive matrix protein 1
zma-u.5	103651530	actin cytoskeleton-regulatory complex protein pan1
tae-r.2	123061356	formin-like protein 20
tae-r.2	123069999	formin-like protein 20
hvu-r.1	123443759	formin-like protein 20
sbi-r.1	8078645	protein enabled homolog
bdi-r.1	100841216	pollen-specific leucine-rich repeat extensin-like protein 1

Top 50 coexpressed genes to 100804824 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100804824 (gma-u.5 coexpression data)

CoexMap"100804824"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003534933.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, nucl 4, chlo 1, extr 1, E.R. 1

(predict for XP_003534933.1)

Subcellular
localization
TargetP

mito 3

(predict for XP_003534933.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100804824	gma-r.7 for 100804824	gma-u.5 for 100811539	gma-u.5 for 100799093	gma-u.5 for 100814577	mtr-u.5 for 11425770	mtr-u.5 for 25486437	mtr-u.5 for 11418916	ppo-u.5 for 7484648	ppo-u.5 for 18094844	ath-u.5 for AT5G57070	ath-u.5 for AT1G72790	bra-r.6 for 103845144	bra-r.6 for 103831783	bra-r.6 for 103830779	vvi-u.5 for 104880208	vvi-u.5 for 100261010	ghi-r.1 for 107907120	ghi-r.1 for 107916402	ghi-r.1 for 107931562	bna-r.1 for 111200297	bna-r.1 for 106354241	bna-r.1 for 106377544	cit-r.1 for 102615352	sly-u.5 for 104646528	sly-u.5 for 101260449	sot-r.1 for 107059788	sot-r.1 for 107060823	sot-r.1 for 102595173	nta-r.1 for 107771468	nta-r.1 for 107804792	nta-r.1 for 107808231	osa-u.5 for 4324204	zma-u.5 for 111589982	zma-u.5 for 103651530	tae-r.2 for 123061356	tae-r.2 for 123069999	hvu-r.1 for 123443759	sbi-r.1 for 8078645	bdi-r.1 for 100841216

Ortholog

Ortholog ID: 3155

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

WW domain-binding protein 11

uncharacterized LOC100811539

verprolin

WASP homolog-associated protein with actin, membranes and microtubules

formin-like protein 7

uncharacterized LOC11418916

formin-like protein 14

uncharacterized LOC18094844

hydroxyproline-rich glycoprotein family protein

pollen-specific leucine-rich repeat extensin-like protein 2

uncharacterized LOC103831783

caskin-1

formin-like protein 7

formin-like protein 13

formin-like protein 5

bromodomain-containing protein 4

actin cytoskeleton-regulatory complex protein PAN1

COPII coat assembly protein SEC16

uncharacterized LOC106406401

formin-like protein 13

pollen-specific leucine-rich repeat extensin-like protein 1

uncharacterized LOC104646528

pollen-specific leucine-rich repeat extensin-like protein 1

formin-like protein 20

uncharacterized LOC107771468

uncharacterized LOC107804792

uncharacterized LOC107768861

formin-like protein 7

serine/arginine repetitive matrix protein 1

actin cytoskeleton-regulatory complex protein pan1

formin-like protein 20

protein enabled homolog

pollen-specific leucine-rich repeat extensin-like protein 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00270	Cysteine and methionine metabolism	2
ppo00670	One carbon pool by folate	2
ppo00999	Biosynthesis of various plant secondary metabolites	2
ppo01230	Biosynthesis of amino acids	2
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3
bra04142	Lysosome	2
bra04626	Plant-pathogen interaction	2
bra00860	Porphyrin metabolism	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04814	Motor proteins	2
vvi03015	mRNA surveillance pathway	2
vvi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00380	Tryptophan metabolism	3
ghi00940	Phenylpropanoid biosynthesis	3
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	7
ghi01250	Biosynthesis of nucleotide sugars	5
ghi04075	Plant hormone signal transduction	5
ghi00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	3
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta01240	Biosynthesis of cofactors	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	5
nta03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

100804824

100811539

100799093

11425770

25486437

11418916

7484648

18094844

835811

843610

103845144

103831783

103851789

104880208

100261010

107907120

107897427

107904323

111200297

106406401

106417459

102615352

104646528

101260449

107059788

107060823

102595173

107771468

107804792

107768861

4324204

111589982

103651530

123061356

123069999

123443759

8078645

100841216

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	2	2	3	2	3	3	1	2	3	3	1	2	2	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100804824 (gma-u.5 coexpression data)

Top 50 enrichment test to 100804824 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**