Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100806042   pentatricopeptide repeat-containing protein At5g46460, mitochondrial 
 gma-r.7   100806042   pentatricopeptide repeat-containing protein At5g46460, mitochondrial 
 mtr-u.5   11422614   pentatricopeptide repeat-containing protein At5g46460, mitochondrial 
 ath-u.5   AT5G46440   PPR containing-like protein 
 ath-u.5   AT5G46460   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103827731   pentatricopeptide repeat-containing protein At5g46460, mitochondrial 
 ghi-r.1   107891732   pentatricopeptide repeat-containing protein At5g46460, mitochondrial 
 bna-r.1   106411215   pentatricopeptide repeat-containing protein At5g46460, mitochondrial 
 bna-r.1   125589828   pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like 
 cit-r.1   102611131   pentatricopeptide repeat-containing protein At5g46460, mitochondrial 
 sly-u.5   101258621   pentatricopeptide repeat-containing protein At5g46460, mitochondrial 
 sot-r.1   102603541   pentatricopeptide repeat-containing protein At5g46460, mitochondrial 
 nta-r.1   107774354   pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like 
 nta-r.1   107825592   pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like 

close


Top 50 coexpressed genes to 100806042 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100806042 (gma-u.5 coexpression data)

CoexMap"100806042"


gmaLOC100806042 | Entrez gene ID : 100806042      
Species gma mtr ath bra ghi bna cit sly sot nta sbi osa tae hvu ppo vvi zma cre bdi
Paralog 2 1 2 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003532785.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto 1,  E.R. 1,  cyto_mito 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_003532785.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_003532785.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100806042
gma-r.7
for
100806042
mtr-u.5
for
11422614
ath-u.5
for
AT5G46440
ath-u.5
for
AT5G46460
bra-r.6
for
103827731
ghi-r.1
for
107891732
bna-r.1
for
106411215
bna-r.1
for
125589828
cit-r.1
for
102611131
sly-u.5
for
101258621
sot-r.1
for
102603541
nta-r.1
for
107774354
nta-r.1
for
107825592


Ortholog ID: 12935
Species gma mtr ath ath bra ghi bna bna cit sly sot nta nta
Symbol LOC100806042 LOC11422614 AT5G46440 AT5G46460 LOC103827731 LOC107891732 LOC106411215 LOC125589828 LOC102611131 LOC101258621 LOC102603541 LOC107774354 LOC107825592
Function* pentatricopeptide repeat-containing protein At5g46460, mitochondrial pentatricopeptide repeat-containing protein At5g46460, mitochondrial PPR containing-like protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g46460, mitochondrial pentatricopeptide repeat-containing protein At5g46460, mitochondrial pentatricopeptide repeat-containing protein At5g46460, mitochondrial pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like pentatricopeptide repeat-containing protein At5g46460, mitochondrial pentatricopeptide repeat-containing protein At5g46460, mitochondrial pentatricopeptide repeat-containing protein At5g46460, mitochondrial pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100806042 11422614 834687 834689 103827731 107891732 106411215 125589828 102611131 101258621 102603541 107774354 107825592
The preparation time of this page was 0.2 [sec].