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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100808924   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 gma-r.7   100808924   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 gma-u.5   100789335   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 ppo-u.5   7462035   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 ath-u.5   AT4G14190   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103844873   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 vvi-u.5   100253715   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 ghi-r.1   107890511   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 ghi-r.1   121206054   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 bna-r.1   106365716   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 bna-r.1   106367625   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 cit-r.1   102620247   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 

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Top 50 coexpressed genes to 100808924 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100808924 (gma-u.5 coexpression data)

CoexMap"100808924"


gmaLOC100808924 | Entrez gene ID : 100808924      
Species gma ppo ath bra vvi ghi bna cit sbi osa sot sly mtr tae hvu zma cre nta bdi
Paralog 3 1 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003552730.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_003552730.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003552730.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100808924
gma-r.7
for
100808924
gma-u.5
for
100789335
ppo-u.5
for
7462035
ath-u.5
for
AT4G14190
bra-r.6
for
103844873
vvi-u.5
for
100253715
ghi-r.1
for
107890511
ghi-r.1
for
121206054
bna-r.1
for
106365716
bna-r.1
for
106367625
cit-r.1
for
102620247


Ortholog ID: 14746
Species gma gma ppo ath bra vvi ghi ghi bna bna cit
Symbol LOC100808924 LOC100789335 LOC7462035 AT4G14190 LOC103844873 LOC100253715 LOC107890511 LOC121206054 LOC106365716 LOC106367625 LOC102620247
Function* pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00030 Pentose phosphate pathway 2
gma00230 Purine metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100808924 100789335 7462035 827059 103844873 100253715 107890511 121206054 106365716 106367625 102620247
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